RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ANO4Q32M45 955 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 TMC4Q7Z404 712 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 ALKBH8Q96BT7 664 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 FAM167AQ96KS9 214 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 BEGAINQ9BUH8 593 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 VPS16Q9H269 839 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 NGRNQ9NPE2 291 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 MYH14Q7Z406 1995 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 GOLGA3Q08378 1498 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 MAGEB16A2A368 324 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 CSF2RAP15509 400 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 TKTP29401 623 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 NR2C2P49116 596 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 PLCD1P51178 756 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 SSTP61278 116 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 EXOSC10Q01780 885 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 NONOQ15233 471 aaKnown RBP eCLIP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 TAF12Q16514 161 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 IGSF11Q5DX21 431 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 MILR1Q7Z6M3 343 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 ARMC5Q96C12 935 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 GDPD2Q9HCC8 539 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 LARSQ9P2J5 1176 aaKnown RBP4.65□□□□□ -1.66
SCN3A-209ENST00000639244 VANGL2Q9ULK5 521 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 RWDD3Q9Y3V2 267 aa4.65□□□□□ -1.66
SCN3A-209ENST00000639244 CRTAPO75718 401 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 GLRX3O76003 335 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 DDX58O95786 925 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 SRGNP10124 158 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 RENBPP51606 427 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CASP8Q14790 479 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CCT6BQ92526 530 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 PEX13Q92968 403 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 YME1L1Q96TA2 773 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CENPKQ9BS16 269 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC28BQ9BUN5 200 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 EHD1Q9H4M9 534 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 C12orf10Q9HB07 376 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 GID8Q9NWU2 228 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 MED16Q9Y2X0 877 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 C1orf232A0A0U1RR37 186 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 UBXN8O00124 270 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 N4BP3O15049 544 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CHMP2AO43633 222 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 PRLRP16471 622 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 LMOD1P29536 600 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 EXOSC9Q06265 439 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 PDCD4Q53EL6 469 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 MAP3K21Q5TCX8 1036 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 FAM47EQ6ZV65 393 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 USP51Q70EK9 711 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 RALYLQ86SE5 291 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 FERD3LQ96RJ6 166 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 NDNQ99608 321 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 MTMR12Q9C0I1 747 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 KIAA1586Q9HCI6 787 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 HPS4Q9NQG7 708 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 TAGLN3Q9UI15 199 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 DACH1Q9UI36 760 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CLEC4AQ9UMR7 237 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 ECDO95905 644 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 RPP38P78345 283 aaKnown RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 GSTM4Q03013 218 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 NCAPH2Q6IBW4 605 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CRELD2Q6UXH1 353 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-209ENST00000639244 RTL10Q7L3V2 364 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 CALML6Q8TD86 181 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 SLC16A10Q8TF71 515 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 SDCCAG3Q96C92 435 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 PGBD1Q96JS3 809 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 INPP5FQ9Y2H2 1132 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 LOXHD1Q8IVV2 1947 aa4.65□□□□□ -1.67
SCN3A-209ENST00000639244 SH3D21A4FU49 640 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 XPO1O14980 1071 aaKnown RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 NBNO60934 754 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 APOA4P06727 396 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 DNAJC3Q13217 504 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 MORC3Q14149 939 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 MZT2BQ6NZ67 158 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 BORAQ6PGQ7 559 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 SHQ1Q6PI26 577 aaKnown RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 CNNM3Q8NE01 707 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 PREBQ9HCU5 417 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 WDR6Q9NNW5 1121 aaKnown RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 CRNNQ9UBG3 495 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 FBXO10Q9UK96 956 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 SLC8A2Q9UPR5 921 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 GPC6Q9Y625 555 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC151A5D8V7 595 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 LACTBL1A8MY62 500 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 K7ELQ4 463 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 MATN2O00339 956 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 E2F3O00716 465 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 CDC45O75419 566 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 ITGB1P05556 798 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 TMEM11P17152 192 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 PPP1R2P41236 205 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 CSNK2BP67870 215 aa4.64□□□□□ -1.67
SCN3A-209ENST00000639244 AIMP1Q12904 312 aaKnown RBP4.64□□□□□ -1.67
SCN3A-209ENST00000639244 RALGDSQ12967 914 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms