RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
PAX6-244ENST00000638913 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
PAX6-244ENST00000638913 NT5C3AQ9H0P0 336 aa11.29□□□□□ -0.6
PAX6-244ENST00000638913 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
PAX6-244ENST00000638913 ABCB11O95342 1321 aa11.29□□□□□ -0.6
PAX6-244ENST00000638913 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 KCNK3O14649 394 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 CETN3O15182 167 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 HSF2BPO75031 334 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 CASP4P49662 377 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 IRAK1P51617 712 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 EPHB4P54760 987 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 GNGT1P63211 74 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 SEPT2Q15019 361 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 SPAG5Q96R06 1193 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 DHX36Q9H2U1 1008 aaKnown RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 SAMM50Q9Y512 469 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 DDTLA6NHG4 134 aaPredicted RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 MEIS2O14770 477 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 RPS6KA5O75582 802 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 POLD1P28340 1107 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 HOXD13P35453 343 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 GIT2Q14161 759 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 GPATCH4Q5T3I0 446 aaKnown RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 ZNF572Q7Z3I7 529 aaPredicted RBP11.28□□□□□ -0.6
PAX6-244ENST00000638913 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 CEP63Q96MT8 703 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 AP1M1Q9BXS5 423 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 GANQ9H2C0 597 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 RGL1Q9NZL6 768 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 KDM3AQ9Y4C1 1321 aa11.28□□□□□ -0.6
PAX6-244ENST00000638913 TMCO5BA8MYB1 307 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 ZBTB39O15060 712 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 PPFIA4O75335 1185 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 ARHGAP4P98171 946 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 PDCLQ13371 301 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 MEI1Q5TIA1 1274 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.6
PAX6-244ENST00000638913 RNF10Q8N5U6 811 aaKnown RBP11.27□□□□□ -0.6
PAX6-244ENST00000638913 PIGOQ8TEQ8 1089 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 BHMT2Q9H2M3 363 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 CENPHQ9H3R5 247 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 KCNMB3Q9NPA1 279 aa11.27□□□□□ -0.6
PAX6-244ENST00000638913 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 RAD51CO43502 376 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 CHMP2AO43633 222 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 ZEB2O60315 1214 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 AKAP3O75969 853 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 GCFC2P16383 781 aaKnown RBP11.27□□□□□ -0.61
PAX6-244ENST00000638913 UBXN2AP68543 259 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 CERKLQ49MI3 558 aaPredicted RBP11.27□□□□□ -0.61
PAX6-244ENST00000638913 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 IFT20Q8IY31 132 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
PAX6-244ENST00000638913 BCAS4Q8TDM0 211 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 COA1Q9GZY4 146 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 ARMCX3Q9UH62 379 aaPredicted RBP11.27□□□□□ -0.61
PAX6-244ENST00000638913 SWAP70Q9UH65 585 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
PAX6-244ENST00000638913 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
PAX6-244ENST00000638913 CEP104O60308 925 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 GCNT3O95395 438 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 GNA14O95837 355 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 SPATA31C1P0DKV0 1188 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 UCHL3P15374 230 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 HYIQ5T013 277 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 TEKT1Q969V4 418 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 RUSC1Q9BVN2 902 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 EDEM3Q9BZQ6 932 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 DNM3Q9UQ16 869 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 PON1P27169 355 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 CRKP46108 304 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 ITIH3Q06033 890 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 PPFIA1Q13136 1202 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 NNTQ13423 1086 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 CTTNQ14247 550 aaKnown RBP11.26□□□□□ -0.61
PAX6-244ENST00000638913 HLTFQ14527 1009 aaKnown RBP eCLIP11.26□□□□□ -0.61
PAX6-244ENST00000638913 EXOC3L4Q17RC7 722 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
PAX6-244ENST00000638913 CFAP58Q5T655 872 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 EMBQ6PCB8 327 aa11.26□□□□□ -0.61
PAX6-244ENST00000638913 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms