RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 KCNMB3Q9NPA1 279 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 TANC1Q9C0D5 1861 aa24.64■■□□□ 1.54
SCN1B-206ENST00000638536 CHMP2AO43633 222 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 GAS7O60861 476 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 ACRP10323 421 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 ATP4AP20648 1035 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 PLCB4Q15147 1175 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 TRIM71Q2Q1W2 868 aaKnown RBP24.64■■□□□ 1.53
SCN1B-206ENST00000638536 ZNF746Q6NUN9 644 aaPredicted RBP24.64■■□□□ 1.53
SCN1B-206ENST00000638536 TDHQ8IZJ6 230 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 ATP6V0A1Q93050 837 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 RIT2Q99578 217 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 AZI2Q9H6S1 392 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 EVPLQ92817 2033 aa24.64■■□□□ 1.53
SCN1B-206ENST00000638536 B3GNT9Q6UX72 402 aa24.63■■□□□ 1.53
SCN1B-206ENST00000638536 PLPPR4Q7Z2D5 763 aa24.63■■□□□ 1.53
SCN1B-206ENST00000638536 BACH1O14867 736 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 KRT76Q01546 638 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 CUL4AQ13619 759 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 SAFBQ15424 915 aaKnown RBP eCLIP24.62■■□□□ 1.53
SCN1B-206ENST00000638536 MIS18BP1Q6P0N0 1132 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 SERINC5Q86VE9 423 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 TMEM199Q8N511 208 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 TEKT3Q9BXF9 490 aa24.62■■□□□ 1.53
SCN1B-206ENST00000638536 GCFC2P16383 781 aaKnown RBP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 PTK7Q13308 1070 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 MARCH8Q5T0T0 291 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 AFAP1L1Q8TED9 768 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 TRAPPC12Q8WVT3 735 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 FOXP1Q9H334 677 aaPredicted RBP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 ZNF302Q9NR11 478 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 DISC1Q9NRI5 854 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 PCDHA10Q9Y5I2 948 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 IQCF3P0C7M6 154 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 CKBP12277 381 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 INSRRP14616 1297 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 ATP2B1P20020 1258 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 PPFIA1Q13136 1202 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 GPNMBQ14956 572 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 TRAF7Q6Q0C0 670 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 TRMT1LQ7Z2T5 733 aaKnown RBP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 SMAP1Q8IYB5 467 aaPredicted RBP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 GABBR1Q9UBS5 961 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 SMC3Q9UQE7 1217 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 SAMM50Q9Y512 469 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 MAFBQ9Y5Q3 323 aaPredicted RBP24.61■■□□□ 1.53
SCN1B-206ENST00000638536 CDH23Q9H251 3354 aa24.61■■□□□ 1.53
SCN1B-206ENST00000638536 NRCAMQ92823 1304 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 PITPNM1O00562 1244 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 SOX1O00570 391 aaPredicted RBP24.6■■□□□ 1.53
SCN1B-206ENST00000638536 IGBP1P78318 339 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 GRIK4Q16099 956 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 UGCGQ16739 394 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 PDXDC2PQ6P474 469 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 VAV3Q9UKW4 847 aa24.6■■□□□ 1.53
SCN1B-206ENST00000638536 WDR64B1ANS9 1081 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 EML1O00423 815 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 PPIGQ13427 754 aaKnown RBP eCLIP24.59■■□□□ 1.53
SCN1B-206ENST00000638536 BFSP2Q13515 415 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 TMEM240Q5SV17 173 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 ZNF618Q5T7W0 954 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 RUFY4Q6ZNE9 571 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 CAGE1Q8TC20 777 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 TRPC6Q9Y210 931 aa24.59■■□□□ 1.53
SCN1B-206ENST00000638536 A0A1W2PPC1 479 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 POTEB3A0JP26 581 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 ZNF862O60290 1169 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 PSAPP07602 524 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 U2AF2P26368 475 aaKnown RBP eCLIP24.58■■□□□ 1.53
SCN1B-206ENST00000638536 RBL2Q08999 1139 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 POTEBQ6S5H4 581 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 ZNF365Q70YC5 407 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 DEFB128Q7Z7B8 93 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 NOSTRINQ8IVI9 506 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 OSBPL7Q9BZF2 842 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 TMEM60Q9H2L4 133 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 IL23AQ9NPF7 189 aa24.58■■□□□ 1.53
SCN1B-206ENST00000638536 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.58■■□□□ 1.53
SCN1B-206ENST00000638536 FXR1P51114 621 aaKnown RBP eCLIP24.57■■□□□ 1.52
SCN1B-206ENST00000638536 NBR1Q14596 966 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 FAM160B1Q5W0V3 765 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 RETREG2Q8NC44 543 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 FAM20AQ96MK3 541 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 LOXHD1Q8IVV2 1947 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 IGSF9BQ9UPX0 1349 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 ZBTB42B2RXF5 422 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 SELPP16109 830 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 MBTPS1Q14703 1052 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 LRRC8DQ7L1W4 858 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 MIER3Q7Z3K6 550 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 NAP1L4Q99733 375 aaKnown RBP24.57■■□□□ 1.52
SCN1B-206ENST00000638536 TCEAL9Q9UHQ7 104 aa24.57■■□□□ 1.52
SCN1B-206ENST00000638536 SIP14410 1827 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 MBLAC1A4D2B0 266 aaPredicted RBP24.56■■□□□ 1.52
SCN1B-206ENST00000638536 TBX3O15119 743 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 GNAT1P11488 350 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 MCM7P33993 719 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 THPOP40225 353 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 SPIRE1Q08AE8 756 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms