RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 TAF11Q15544 211 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 CCDC96Q2M329 555 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 PIGWQ7Z7B1 504 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 LMNTD2Q8IXW0 634 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 TGFBRAP1Q8WUH2 860 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
GFAP-228ENST00000638488 SAP30BPQ9UHR5 308 aaKnown RBP13.26□□□□□ -0.29
GFAP-228ENST00000638488 ZSCAN9O15535 394 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 DNM2P50570 870 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 ODF2Q5BJF6 829 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 TRPM8Q7Z2W7 1104 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 SHISA4Q96DD7 197 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 PLEKHG4BQ96PX9 1271 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 RNF26Q9BY78 433 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 ARPP21Q9UBL0 812 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 CNOT8Q9UFF9 292 aaKnown RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 NID2Q14112 1375 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 EVI5O60447 810 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 PARP1P09874 1014 aaKnown RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 MYBP10242 640 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 XBP1P17861 261 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 PDE6BP35913 854 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 TROAPQ12815 778 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 CUL1Q13616 776 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 PKN1Q16512 942 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 ARMC3Q5W041 872 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 NUGGCQ68CJ6 796 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 APBB1IPQ7Z5R6 666 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
GFAP-228ENST00000638488 ZNF317Q96PQ6 595 aaPredicted RBP13.25□□□□□ -0.29
GFAP-228ENST00000638488 ESYT3A0FGR9 886 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 E7ENQ6 273 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 TFAP4Q01664 338 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 EARS2Q5JPH6 523 aaKnown RBP13.24□□□□□ -0.29
GFAP-228ENST00000638488 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 ERICH1Q86X53 443 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 MAPKAPK5Q8IW41 473 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 NELFBQ8WX92 580 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 FAM167BQ9BTA0 163 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 ISCUQ9H1K1 167 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
GFAP-228ENST00000638488 LRRC42Q9Y546 428 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 BAZ2BQ9UIF8 2168 aaKnown RBP13.24□□□□□ -0.29
GFAP-228ENST00000638488 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 LCA5LO95447 670 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 SRGNP10124 158 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
GFAP-228ENST00000638488 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 SLC44A5Q8NCS7 719 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
GFAP-228ENST00000638488 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
GFAP-228ENST00000638488 LY75O60449 1722 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 A0A087X0B3 334 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 MOCS3O95396 460 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 NCALDP61601 193 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 CYP27A1Q02318 531 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 CCDC42Q96M95 316 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 TLR10Q9BXR5 811 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 EHD2Q9NZN4 543 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 PCDHA13Q9Y5I0 950 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 ZSCAN5CA6NGD5 496 aaPredicted RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 ZNF263O14978 683 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 CXCR5P32302 372 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 KRT2P35908 639 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 ATP11AP98196 1134 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 UAP1Q16222 522 aaPredicted RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 ZNF658Q5TYW1 1059 aaPredicted RBP13.23□□□□□ -0.29
GFAP-228ENST00000638488 ANO7Q6IWH7 933 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 RMND1Q9NWS8 449 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
GFAP-228ENST00000638488 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 USP17L3A6NCW0 530 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 USP17L4A6NCW7 530 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 BACH1O14867 736 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 PJA2O43164 708 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 CALM1P0DP23 149 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 CALM2P0DP24 149 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms