RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 GCNAQ96QF7 691 aa14.06□□□□□ -0.16
UBE3A-228ENST00000638155 FHDC1Q9C0D6 1143 aaPredicted RBP14.06□□□□□ -0.16
UBE3A-228ENST00000638155 STXBP3O00186 592 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 SLC27A2O14975 620 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 DLGAP3O95886 979 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 CHMLP26374 656 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 METTL23Q86XA0 190 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 MRPL47Q9HD33 250 aaKnown RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 SENP1Q9P0U3 644 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 KIF14Q15058 1648 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 ZMYND10O75800 440 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 PSMA4P25789 261 aaKnown RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 INPP5AQ14642 412 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 PARP9Q8IXQ6 854 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 TTC8Q8TAM2 541 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 CYGBQ8WWM9 190 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 NFIBO00712 420 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 CYLC2Q14093 348 aaPredicted RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 ANXA13P27216 316 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 KSR2Q6VAB6 950 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 H0YIN7 160 aa14.05□□□□□ -0.16
UBE3A-228ENST00000638155 SEC24DO94855 1032 aaPredicted RBP14.05□□□□□ -0.16
UBE3A-228ENST00000638155 FOSL2P15408 326 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 BEND6Q5SZJ8 279 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CPXCR1Q8N123 301 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CNPY4Q8N129 248 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 PBXIP1Q96AQ6 731 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ULK4Q96C45 1275 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TUBGCP2Q9BSJ2 902 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CCDC195A0A1B0GUA6 201 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CENPPQ6IPU0 288 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 SUPT20HQ8NEM7 779 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 RNF14Q9UBS8 474 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 PIK3R2O00459 728 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.165e-7■■■■■ 40.2
UBE3A-228ENST00000638155 NDUFA5Q16718 116 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ARMCX5Q6P1M9 558 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 DNAJC24Q6P3W2 148 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 DEPDC7Q96QD5 511 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 EML4Q9HC35 981 aaKnown RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ZBED1O96006 694 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CDC25BP30305 580 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ANKS3Q6ZW76 656 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TTC17Q96AE7 1141 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 OMA1Q96E52 524 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TK2O00142 265 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 RAD23BP54727 409 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ADAM9Q13443 819 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 LAMC2Q13753 1193 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CYTH1Q15438 398 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 SLC30A9Q6PML9 568 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 ECT2Q9H8V3 914 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 DDX25Q9UHL0 483 aaKnown RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 COL4A3BPQ9Y5P4 624 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 TTLL7Q6ZT98 887 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 WDR48Q8TAF3 677 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CUL3Q13618 768 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 CDH24Q86UP0 819 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 MLXIPQ9HAP2 919 aa14.04□□□□□ -0.16
UBE3A-228ENST00000638155 GOLGA8IPA6NC78 632 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 AURKCQ9UQB9 309 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 E5RI56 91 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 KRT38O76015 456 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 CIITAP33076 1130 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 ATAD3BQ5T9A4 648 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 NSMFQ6X4W1 530 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 UTP6Q9NYH9 597 aaKnown RBP14.03□□□□□ -0.16
UBE3A-228ENST00000638155 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 KLHL24Q6TFL4 600 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 NT5C1BQ96P26 610 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 UBAP1Q9NZ09 502 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 PRPF4O43172 522 aaKnown RBP eCLIP14.03□□□□□ -0.162e-8■□□□□ 10.1
UBE3A-228ENST00000638155 RALBP11234 206 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 SOX6P35712 828 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 NIM1KQ8IY84 436 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
UBE3A-228ENST00000638155 ENC1O14682 589 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 MAPRE2Q15555 327 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 CCDC127Q96BQ5 260 aa14.03□□□□□ -0.16
UBE3A-228ENST00000638155 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE3A-228ENST00000638155 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms