RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 ARGLU1Q9NWB6 273 aaPredicted RBP12.73□□□□□ -0.37
CLN6-217ENST00000636964 PSD3Q9NYI0 1048 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
CLN6-217ENST00000636964 ZBTB39O15060 712 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ACTN2P35609 894 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 COASYQ13057 564 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 CEP55Q53EZ4 464 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ZC3H12AQ5D1E8 599 aaKnown RBP12.72□□□□□ -0.37
CLN6-217ENST00000636964 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ANKRD20A12PQ8NF67 263 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
CLN6-217ENST00000636964 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
CLN6-217ENST00000636964 UBXN1Q04323 297 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
CLN6-217ENST00000636964 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■□□□ 13.8
CLN6-217ENST00000636964 CYP11B2P19099 503 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 RPA1P27694 616 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 USP14P54578 494 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ARSHQ5FYA8 562 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
CLN6-217ENST00000636964 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 MAP2K7O14733 419 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 PPP1R12AO14974 1030 aaPredicted RBP12.71□□□□□ -0.37
CLN6-217ENST00000636964 NRDCO43847 1150 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
CLN6-217ENST00000636964 PBX1P40424 430 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 SPAG1Q07617 926 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
CLN6-217ENST00000636964 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 PPFIBP1Q86W92 1011 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 CXorf56Q9H5V9 222 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
CLN6-217ENST00000636964 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
CLN6-217ENST00000636964 VWA5AO00534 786 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 GAS7O60861 476 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 ZBED4O75132 1171 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 ITGB5P18084 799 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 CASP14P31944 242 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 HSD17B4P51659 736 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 SLC12A3P55017 1021 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.38
CLN6-217ENST00000636964 NELFCDQ8IXH7 590 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 DYDC2Q96IM9 177 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 BAG1Q99933 345 aaPredicted RBP12.71□□□□□ -0.38
CLN6-217ENST00000636964 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.38
CLN6-217ENST00000636964 BICDL2A1A5D9 508 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 PSMD10O75832 226 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 ATL2Q8NHH9 583 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 THAP9Q9H5L6 903 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 EHMT1Q9H9B1 1298 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 B4DLN1 442 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 AKR1B15C9JRZ8 316 aaPredicted RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 RNF225M0QZC1 329 aaPredicted RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLN6-217ENST00000636964 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 FAM26FQ5R3K3 315 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 TRMT1LQ7Z2T5 733 aaKnown RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 CNOT6LQ96LI5 555 aaKnown RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 JRKLQ9Y4A0 524 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 PEX10O60683 326 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
CLN6-217ENST00000636964 EHHADHQ08426 723 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 DRC1Q96MC2 740 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
CLN6-217ENST00000636964 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 SFI1A8K8P3 1242 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 H0YHG0 523 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 IPO5O00410 1097 aaKnown RBP12.69□□□□□ -0.38
CLN6-217ENST00000636964 GYPCP04921 128 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
CLN6-217ENST00000636964 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
CLN6-217ENST00000636964 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 C9orf131Q5VYM1 1079 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
CLN6-217ENST00000636964 SLC5A5Q92911 643 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms