RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 DDX42Q86XP3 938 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 CEP57Q86XR8 500 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 METTL13Q8N6R0 699 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 GLIS3Q8NEA6 775 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 HAUS2Q9NVX0 235 aa16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 SUCLA2Q9P2R7 463 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 UTP11Q9Y3A2 253 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-220ENST00000635988 COL4A1P02462 1669 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 A0A0A6YYK5 440 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 PTK2Q05397 1052 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 PPP2R5EQ16537 467 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 PEX26Q7Z412 305 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 VPS36Q86VN1 386 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 HOOK3Q86VS8 718 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 ZC3H3Q8IXZ2 948 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 CCT6BQ92526 530 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 N4BP2L2Q92802 583 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 CHMP6Q96FZ7 201 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 SPAG5Q96R06 1193 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 NT5C3AQ9H0P0 336 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 DDX47Q9H0S4 455 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 CNOT8Q9UFF9 292 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 INTUQ9ULD6 942 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 CETN3O15182 167 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 BAG3O95817 575 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 SLFN11Q7Z7L1 901 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 ANKS4BQ8N8V4 417 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 TPCN2Q8NHX9 752 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 AP1M1Q9BXS5 423 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 NEUROG2Q9H2A3 272 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 NAGPAQ9UK23 515 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 KDM3AQ9Y4C1 1321 aa16.17■□□□□ 0.18
CACNA1A-220ENST00000635988 POTEMA6NI47 508 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 F8VZ95 297 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 DAPK3O43293 454 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 RASA1P20936 1047 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 DRD4P21917 467 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 PRKCIP41743 596 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 NPEPPSP55786 919 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ALKBH5Q6P6C2 394 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 KCNK18Q7Z418 384 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 TLCD1Q96CP7 247 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 HVCN1Q96D96 273 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 RAB17Q9H0T7 212 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 CCDC88AQ3V6T2 1871 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ATAD5Q96QE3 1844 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 SLC37A4O43826 429 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 MGRN1O60291 552 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ZBTB48P10074 688 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 KCNA4P22459 653 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 GSTO1P78417 241 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 DHX9Q08211 1270 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 KCNH2Q12809 1159 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ADAM9Q13443 819 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 BYSLQ13895 437 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ERMARDQ5T6L9 678 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 CCDC197Q8NCU1 140 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 PIGSQ96S52 555 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 ATP6V0A4Q9HBG4 840 aa16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 TTC7AQ9ULT0 858 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-220ENST00000635988 SLC26A4O43511 780 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 GSTA1P08263 222 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 ADCY7P51828 1080 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 ZNF571Q7Z3V5 609 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 SCLT1Q96NL6 688 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 XPO6Q96QU8 1125 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 TMEM260Q9NX78 707 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 AMACRQ9UHK6 382 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 DIS3Q9Y2L1 958 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 PPFIA2O75334 1257 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 TDP2O95551 362 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 KLRK1P26718 216 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 HYIQ5T013 277 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 CROCCP2Q86T23 111 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 CPVLQ9H3G5 476 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
CACNA1A-220ENST00000635988 CCT8L1PA6NM43 557 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 TRIM37O94972 964 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 PDHBP11177 359 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 FLT3P36888 993 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 PPP4CP60510 307 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 USP17L2Q6R6M4 530 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms