RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHRNA7-208ENST00000635978 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
CHRNA7-208ENST00000635978 RTEL1Q9NZ71 1219 aa8.34□□□□□ -1.07
CHRNA7-208ENST00000635978 NYAP2Q9P242 653 aa8.34□□□□□ -1.07
CHRNA7-208ENST00000635978 MTUS1Q9ULD2 1270 aa8.34□□□□□ -1.07
CHRNA7-208ENST00000635978 SCN10AQ9Y5Y9 1956 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 TET1Q8NFU7 2136 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 RBM47A0AV96 593 aaKnown RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 TSPY2A6NKD2 308 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 RBAK-RBAKDNI3L0D1 243 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 RANBP6O60518 1105 aaKnown RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 GFRA3O60609 400 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 YEATS4O95619 227 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 XBP1P17861 261 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 LTBRP36941 435 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 KCNJ6P48051 423 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 NASPP49321 788 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 PDE4DQ08499 809 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 RBL2Q08999 1139 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 ZSCAN23Q3MJ62 389 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 CCDC183Q5T5S1 534 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 LEO1Q8WVC0 666 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 FOXD4L4Q8WXT5 416 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 EDAQ92838 391 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 ALG1Q9BT22 464 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 ACAD9Q9H845 621 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 VTA1Q9NP79 307 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 TOMM22Q9NS69 142 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 MUTYHQ9UIF7 546 aa8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 NAP1L2Q9ULW6 460 aaPredicted RBP8.33□□□□□ -1.08
CHRNA7-208ENST00000635978 SIP14410 1827 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 FIBPO43427 364 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 RAD21O60216 631 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 NBNO60934 754 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 RASA1P20936 1047 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 PTPN11Q06124 597 aaPredicted RBP8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 BFSP2Q13515 415 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 TRIM29Q14134 588 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 CTC1Q2NKJ3 1217 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 TCEAL5Q5H9L2 206 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 CAVIN1Q6NZI2 390 aaKnown RBP8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 CNKSR3Q6P9H4 555 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 TMTC3Q6ZXV5 915 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 EEPD1Q7L9B9 569 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 RNF135Q8IUD6 432 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 CTCFLQ8NI51 663 aaPredicted RBP8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 AFAP1L1Q8TED9 768 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 MKL1Q969V6 931 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 SPATA32Q96LK8 384 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 PRRX2Q99811 253 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 C17orf80Q9BSJ5 609 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 HOMER2Q9NSB8 354 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 CYP39A1Q9NYL5 469 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 FEM1BQ9UK73 627 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 DNAH14Q0VDD8 3507 aa8.32□□□□□ -1.08
CHRNA7-208ENST00000635978 MYH8P13535 1937 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 COL4A6Q14031 1691 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 ABHD14A-ACY1A0A1B0GW23 586 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 A0A1W2PQ27 194 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 A0A1W2PQ64 194 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 A0A1W2PQD8 194 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 A6NJR5 290 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 MMP1P03956 469 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 CPT1AP50416 773 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 HTRA4P83105 476 aaPredicted RBP8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 TFAP4Q01664 338 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 SAFBQ15424 915 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 TIGD5Q53EQ6 642 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 MYSM1Q5VVJ2 828 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 LRSAM1Q6UWE0 723 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 FERMT3Q86UX7 667 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 BANK1Q8NDB2 785 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 CAGE1Q8TC20 777 aa8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
CHRNA7-208ENST00000635978 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms