RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CKMP06732 381 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 INSRRP14616 1297 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 NAT1P18440 290 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 IGFALSP35858 605 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 EVA1CP58658 441 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PRR5P85299 388 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 ZNF460Q14592 562 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PUM1Q14671 1186 aaKnown RBP eCLIP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 ABHD17CQ6PCB6 329 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 TTLL7Q6ZT98 887 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PCGF5Q86SE9 256 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 CPNE8Q86YQ8 564 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 NETO2Q8NC67 525 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 CPA5Q8WXQ8 436 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 ALG3Q92685 438 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PEX11GQ96HA9 241 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 RPS6KC1Q96S38 1066 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 FAM126AQ9BYI3 521 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 GEMIN8Q9NWZ8 242 aaKnown RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 SMPD4Q9NXE4 827 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 PCDHA9Q9Y5H5 950 aa3.73□□□□□ -1.81
PSPC1-208ENST00000635562 TNPO3Q9Y5L0 923 aaKnown RBP3.73□□□□□ -1.81
PSPC1-208ENST00000635562 CCDC189A1A4V9 331 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 CFAP69A5D8W1 941 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 C1QTNF3-AMACRE9PGA6 284 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 EPB41L2O43491 1005 aaKnown RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 PLA2G1BP04054 148 aaKnown RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 ITGB3P05106 788 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 ASGR2P07307 311 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 GLI4P10075 376 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 MYCLP1P12525 358 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 COPB2P35606 906 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 GTF2A2P52657 109 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 LSAMPQ13449 338 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 KIZQ2M2Z5 673 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 HABP4Q5JVS0 413 aaKnown RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 ZNF280DQ6N043 979 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 AFAP1L2Q8N4X5 818 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 PCDH19Q8TAB3 1148 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 PLEKHO2Q8TD55 490 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 STAG1Q8WVM7 1258 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 MAGEB10Q96LZ2 347 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 SAMD11Q96NU1 681 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 SPATA25Q9BR10 227 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 CAAP1Q9H8G2 361 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 DDX56Q9NY93 547 aaKnown RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 PPARGC1AQ9UBK2 798 aaKnown RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 PCDHA8Q9Y5H6 950 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 TIMM13Q9Y5L4 95 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-208ENST00000635562 X6R8D5 127 aa3.72□□□□□ -1.81
PSPC1-208ENST00000635562 H7BY64 318 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 PRC1O43663 620 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 NOBOXO60393 691 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 NPHS1O60500 1241 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 ZRANB2O95218 330 aaKnown RBP eCLIP3.71□□□□□ -1.821e-6■■■■■ 28
PSPC1-208ENST00000635562 EYA4O95677 639 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 ATF2P15336 505 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 CNR2P34972 360 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 BCL6P41182 706 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 MECP2P51608 486 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 RPL11P62913 178 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 ADAM17P78536 824 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 GUCY1A3Q02108 690 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 PCBP1Q15365 356 aaKnown RBP eCLIP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 SEPT7Q16181 437 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 GLIPR1L2Q4G1C9 344 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 CDCA2Q69YH5 1023 aaPredicted RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 ZCCHC8Q6NZY4 707 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 FAM124AQ86V42 546 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 FMNL3Q8IVF7 1028 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 PPM1KQ8N3J5 372 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 CHAC2Q8WUX2 184 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 C1QTNF3Q9BXJ4 246 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 CELF4Q9BZC1 486 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 FBLN5Q9UBX5 448 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 NRBP1Q9UHY1 535 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 G3BP2Q9UN86 482 aaKnown RBP3.71□□□□□ -1.82
PSPC1-208ENST00000635562 PCDHA2Q9Y5H9 948 aa3.71□□□□□ -1.82
PSPC1-208ENST00000635562 TTC36A6NLP5 189 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 B4E1Z4 1266 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 OPA1O60313 960 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 SOD2P04179 222 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 S100BP04271 92 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 HSP90AA1P07900 732 aaKnown RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 JMJD7P0C870 316 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 TNFRSF1AP19438 455 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 GRK2P25098 689 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 GRK3P35626 688 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 SOX5P35711 763 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 SARSP49591 514 aaKnown RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 DLX2Q07687 328 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 CACNB2Q08289 660 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-208ENST00000635562 KIAA2012Q0VF49 1180 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 PAK1Q13153 545 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 CCDC96Q2M329 555 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 CPZQ66K79 652 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 CNNM4Q6P4Q7 775 aa3.7□□□□□ -1.82
PSPC1-208ENST00000635562 PKN3Q6P5Z2 889 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms