RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RTN1Q16799 776 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 TIGD5Q53EQ6 642 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 FIBCD1Q8N539 461 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 FANCBQ8NB91 859 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 SPZ1Q9BXG8 430 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 RBM28Q9NW13 759 aaKnown RBP17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 BRPF3Q9ULD4 1205 aa17.81■□□□□ 0.44
SNRNP48-203ENST00000634363 MEIS2O14770 477 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 CSPG5O95196 566 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 CTNNB1P35222 781 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 TCF7P36402 384 aaPredicted RBP17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 ADAM17P78536 824 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 APOBRQ0VD83 1088 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 FAM26DQ5JW98 314 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 CMTR1Q8N1G2 835 aaKnown RBP17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 FBXL16Q8N461 479 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 GIMAP8Q8ND71 665 aaPredicted RBP17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 UIMC1Q96RL1 719 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 SENP7Q9BQF6 1050 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
SNRNP48-203ENST00000634363 ATP9AO75110 1047 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 RSPH3Q86UC2 560 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 NEK9Q8TD19 979 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 GLG1Q92896 1179 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 PDRG1Q9NUG6 133 aa17.79■□□□□ 0.44
SNRNP48-203ENST00000634363 RALGAPA2Q2PPJ7 1873 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 CCDC196A0A1B0GTZ2 297 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 IGBP1P78318 339 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 PPFIA1Q13136 1202 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 TMTC3Q6ZXV5 915 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 CCDC82Q8N4S0 544 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 DNAJB3Q8WWF6 145 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 SEPT1Q8WYJ6 367 aa17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 PABPC5Q96DU9 382 aaKnown RBP17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 ARIH1Q9Y4X5 557 aaPredicted RBP17.78■□□□□ 0.44
SNRNP48-203ENST00000634363 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 ENPP3O14638 875 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 BMPR1AP36894 532 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 LPIN1Q14693 890 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 GRIK4Q16099 956 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 UBE2SQ16763 222 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 CSPP1Q1MSJ5 1256 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 TAF2Q6P1X5 1199 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 IGFLR1Q9H665 355 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 ERAP1Q9NZ08 941 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 TUBE1Q9UJT0 475 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 FAM50BQ9Y247 325 aa17.77■□□□□ 0.44
SNRNP48-203ENST00000634363 MYO7AQ13402 2215 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 GSTTP1A0A1W2PQM5 241 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 GRM6O15303 877 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 ALADP13716 330 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 KCNA2P16389 499 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 ITGB5P18084 799 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 MTMR1Q13613 665 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 BTG3Q14201 252 aaPredicted RBP17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 CLUL1Q15846 466 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 GPRASP2Q96D09 838 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 SMARCAD1Q9H4L7 1026 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 CDY2AQ9Y6F7 541 aa17.76■□□□□ 0.43
SNRNP48-203ENST00000634363 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 PRR33A8MZF0 331 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 RB1P06400 928 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 RPAINQ86UA6 219 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 ZBTB10Q96DT7 871 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 C11orf84Q9BUA3 381 aaPredicted RBP17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 C22orf23Q9BZE7 217 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 NID2Q14112 1375 aa17.75■□□□□ 0.43
SNRNP48-203ENST00000634363 ADGRA3Q8IWK6 1321 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 EVCP57679 992 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 MGAT3Q09327 533 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 TMEM62Q0P6H9 643 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 FBXO47Q5MNV8 452 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 MARCH8Q5T0T0 291 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 ALG13Q9NP73 1137 aaKnown RBP17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 RWDD3Q9Y3V2 267 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 ATG2AQ2TAZ0 1938 aa17.74■□□□□ 0.43
SNRNP48-203ENST00000634363 LOXHD1Q8IVV2 1947 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms