RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NMT2O60551 498 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TTLL1O95922 423 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MX1P20591 662 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ITGA7Q13683 1181 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FSCN1Q16658 493 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 KRT40Q6A162 431 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TMED8Q6PL24 325 aaPredicted RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 CHST3Q7LGC8 479 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TOX2Q96NM4 488 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TSEN34Q9BSV6 310 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 NACAP1Q9BZK3 213 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FTOQ9C0B1 505 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ACAD9Q9H845 621 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 SLC38A10Q9HBR0 1119 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF287Q9HBT7 754 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MTMR4Q9NYA4 1195 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 KLK14Q9P0G3 267 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 NYAP2Q9P242 653 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FBXO40Q9UH90 709 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 NRBP1Q9UHY1 535 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ADAMTS5Q9UNA0 930 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 SLC4A7Q9Y6M7 1214 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ELP1O95163 1332 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 RLFQ13129 1914 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 A6NHS1 94 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 M0R2C6 588 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MYL3P08590 195 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 BRD2P25440 801 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 GRNP28799 593 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 NOS2P35228 1153 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FGD1P98174 961 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 PDE4BQ07343 736 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 RTN1Q16799 776 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF746Q6NUN9 644 aaPredicted RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 KLHDC9Q8NEP7 349 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ESYT1Q9BSJ8 1104 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FEM1BQ9UK73 627 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 CCPG1Q9ULG6 757 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 SYNGAP1Q96PV0 1343 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 GOLGA6L3A6NEY3 463 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 RNF113AO15541 343 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 EPB41L2O43491 1005 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 XRCC6P12956 609 aaKnown RBP eCLIP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CALML3P27482 149 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 IRS1P35568 1242 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 PPP1R18Q6NYC8 613 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 FAM126BQ8IXS8 530 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 KBTBD3Q8NAB2 608 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ARNTL2Q8WYA1 636 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 APPBP2Q92624 585 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 KLF16Q9BXK1 252 aaPredicted RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 TRMT13Q9NUP7 481 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 YBX2Q9Y2T7 364 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ADH1CP00326 375 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 SLC3A2P08195 630 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ATP2A2P16615 1042 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CHMLP26374 656 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 GJA9P57773 515 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 MRPS5P82675 430 aaKnown RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 RAB30Q15771 203 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 C11orf91Q3C1V1 193 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 MUM1L1Q5H9M0 696 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 FAM117BQ6P1L5 589 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CYP2U1Q7Z449 544 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 IFNL3Q8IZI9 196 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CHST13Q8NET6 341 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CHURC1Q8WUH1 139 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 IL23AQ9NPF7 189 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ZFHX2Q9C0A1 2572 aaPredicted RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 REV3LO60673 3130 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 DNAJC25-GNG10A0A024R161 153 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ZEB2O60315 1214 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 B4GALT4O60513 344 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CA3P07451 260 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 SMPD1P17405 629 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 KCNQ1P51787 676 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 SERINC3Q13530 473 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 SKOR2Q2VWA4 1001 aaPredicted RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 CCSAPQ6IQ19 270 aaPredicted RBP5.6□□□□□ -1.51
LINC00550-201ENST00000629293 EP400NLQ6ZTU2 488 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 JAZF1Q86VZ6 243 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 ASB2Q96Q27 587 aa5.6□□□□□ -1.51
LINC00550-201ENST00000629293 FRMPD3Q5JV73 1810 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 FOCADQ5VW36 1801 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 MYH8P13535 1937 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 ASTN1O14525 1302 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 SPTBN2O15020 2390 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 CACNA1GO43497 2377 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 ASB14A6NK59 587 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 ZBTB24O43167 697 aaPredicted RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 CDK7P50613 346 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 ANAPC15P60006 121 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 TTLL4Q14679 1199 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 MAMDC4Q6UXC1 1216 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 TMCO2Q7Z6W1 182 aaPredicted RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 MSL3Q8N5Y2 521 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms