RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 KRT40Q6A162 431 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 SEPT1Q8WYJ6 367 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 SLC5A5Q92911 643 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 GJA10Q969M2 543 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
DDX41-219ENST00000629036 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 PSMD10O75832 226 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 CSF2RAP15509 400 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 ATP4AP20648 1035 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 FPGSQ05932 587 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 MBTPS1Q14703 1052 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX41-219ENST00000629036 PTGISQ16647 500 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 FAM47CQ5HY64 1035 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
DDX41-219ENST00000629036 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 WASF1Q92558 559 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 KCNMB3Q9NPA1 279 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 IGSF9BQ9UPX0 1349 aa12.61□□□□□ -0.39
DDX41-219ENST00000629036 ZBTB42B2RXF5 422 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 BTBD18B2RXH4 712 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 KRT2P35908 639 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 FOSBP53539 338 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
DDX41-219ENST00000629036 DIS3L2Q8IYB7 885 aaKnown RBP12.6□□□□□ -0.39
DDX41-219ENST00000629036 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 SCLYQ96I15 445 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.394e-9■■□□□ 11.4
DDX41-219ENST00000629036 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 UPF2Q9HAU5 1272 aaKnown RBP12.6□□□□□ -0.39
DDX41-219ENST00000629036 VAV3Q9UKW4 847 aa12.6□□□□□ -0.39
DDX41-219ENST00000629036 COL4A6Q14031 1691 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
DDX41-219ENST00000629036 KIF28PB7ZC32 967 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
DDX41-219ENST00000629036 TREHO43280 583 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 ZNF76P36508 570 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 CCL23P55773 120 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 SMAD3P84022 425 aaKnown RBP12.59□□□□□ -0.39
DDX41-219ENST00000629036 SPIRE1Q08AE8 756 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 PTK7Q13308 1070 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
DDX41-219ENST00000629036 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 UGCGQ16739 394 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 PPP4R3AQ6IN85 833 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
DDX41-219ENST00000629036 PIK3AP1Q6ZUJ8 805 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 C7orf31Q8N865 590 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 FBXO18Q8NFZ0 1043 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 HAS1Q92839 578 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 OSBPL7Q9BZF2 842 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 UNC45AQ9H3U1 944 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 TBC1D22BQ9NU19 505 aa12.59□□□□□ -0.39
DDX41-219ENST00000629036 ST18O60284 1047 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 ZNF862O60290 1169 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 IQCF3P0C7M6 154 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 CKBP12277 381 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 XBP1P17861 261 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 MARK3P27448 753 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
DDX41-219ENST00000629036 GUCY1B3Q02153 619 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 CUL4AQ13619 759 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 CAGE1Q8TC20 777 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 RIT2Q99578 217 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 SETD4Q9NVD3 440 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
DDX41-219ENST00000629036 ZNF215Q9UL58 517 aaPredicted RBP12.58□□□□□ -0.4
DDX41-219ENST00000629036 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.4
DDX41-219ENST00000629036 ATG2AQ2TAZ0 1938 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 CCDC194A0A1B0GVG4 234 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 C17orf102A2RUQ5 167 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 NBNO60934 754 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 STBD1O95210 358 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 CXCL10P02778 98 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 ACRP10323 421 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
DDX41-219ENST00000629036 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
DDX41-219ENST00000629036 KRT76Q01546 638 aa12.57□□□□□ -0.4
DDX41-219ENST00000629036 PPIGQ13427 754 aaKnown RBP eCLIP12.57□□□□□ -0.41e-11■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms