RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 SMAD2Q15796 467 aaKnown RBP4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 TRMT10BQ6PF06 316 aaKnown RBP4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 TMC5Q6UXY8 1006 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 ZCCHC14Q8WYQ9 949 aaKnown RBP4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 MKL1Q969V6 931 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 MBD6Q96DN6 1003 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 ZSWIM3Q96MP5 696 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 IPPKQ9H8X2 491 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 WASF3Q9UPY6 502 aa4.83□□□□□ -1.64
PTP4A2-220ENST00000627328 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 BLACEA4D250 179 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 ARVCFO00192 962 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 EFCAB14O75071 495 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 CKMP06732 381 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 EPHB4P54760 987 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 GRIN1Q05586 938 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 NFATC3Q12968 1075 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 SERINC3Q13530 473 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 SF3A1Q15459 793 aaKnown RBP4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 CSRP2Q16527 193 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 CD276Q5ZPR3 534 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 C16orf59Q7L2K0 433 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 MTDHQ86UE4 582 aaKnown RBP4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 REXO1L1PQ8IX06 675 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 IGDCC4Q8TDY8 1250 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 FBXW5Q969U6 566 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 CEP89Q96ST8 783 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 DHRS4Q9BTZ2 278 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 ARHGAP20Q9P2F6 1191 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 ADAM29Q9UKF5 820 aa4.82□□□□□ -1.64
PTP4A2-220ENST00000627328 ASXL2Q76L83 1435 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 ZNF839A8K0R7 811 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 KLHL18O94889 574 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 KNG1P01042 644 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 C6orf222P0C671 652 aaPredicted RBP4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 COL6A1P12109 1028 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 PPP2CBP62714 309 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 PPP2CAP67775 309 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 PFKPQ01813 784 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 SKIDA1Q1XH10 827 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 FAM47CQ5HY64 1035 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 FIGNQ5HY92 759 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 DPP8Q6V1X1 898 aaPredicted RBP4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 ARHGEF18Q6ZSZ5 1173 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 EP400NLQ6ZTU2 488 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 KBTBD2Q8IY47 623 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 KCND1Q9NSA2 647 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 PFDN2Q9UHV9 154 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 SRPK3Q9UPE1 567 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 TRAF6Q9Y4K3 522 aa4.81□□□□□ -1.64
PTP4A2-220ENST00000627328 KDM2BQ8NHM5 1336 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 NPEPPSL1A6NEC2 478 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 CUTAO60888 179 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 ST5P78524 1137 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 GUCY1A3Q02108 690 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 DBPQ10586 325 aaPredicted RBP4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 RASA3Q14644 834 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 CRY1Q16526 586 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 FAM209AQ5JX71 171 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 SLFN13Q68D06 897 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 ARHGAP36Q6ZRI8 547 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 Q6ZUG5 572 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 DNAJC10Q8IXB1 793 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 PCDH19Q8TAB3 1148 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 AJUBAQ96IF1 538 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 DEPDC7Q96QD5 511 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 ZNF341Q9BYN7 854 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 SEC61A2Q9H9S3 476 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 CATSPERZQ9NTU4 200 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 ZFP69BQ9UJL9 534 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 MRPS23Q9Y3D9 190 aaKnown RBP4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 TELO2Q9Y4R8 837 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
PTP4A2-220ENST00000627328 H0Y858 1186 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 ACOT7O00154 380 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 DIAPH1O60610 1272 aaKnown RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 LTFP02788 710 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 FAM153BP0C7A2 387 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 HERVK_113P62684 666 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 BTBD8Q5XKL5 378 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 RALYLQ86SE5 291 aaKnown RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 IFNL2Q8IZJ0 200 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 JMYQ8N9B5 988 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 SH3RF2Q8TEC5 729 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 EXOC2Q96KP1 924 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 KATNBL1Q9H079 304 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 PPP4R1LQ9P1A2 415 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 RBPJLQ9UBG7 517 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 ZDHHC9Q9Y397 364 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 PCDHA8Q9Y5H6 950 aa4.79□□□□□ -1.64
PTP4A2-220ENST00000627328 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
PTP4A2-220ENST00000627328 B4GALT4O60513 344 aa4.78□□□□□ -1.64
PTP4A2-220ENST00000627328 CLASP2O75122 1294 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms