RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 CCDC60Q8IWA6 550 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 SMAP1Q8IYB5 467 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 ENGASEQ8NFI3 743 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 SUPT20HL2P0C7V6 817 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 CDC25AP30304 524 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 HOXC8P31273 242 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 GRB10Q13322 594 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 SNW1Q13573 536 aaKnown RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 EPHA7Q15375 998 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 AK8Q96MA6 479 aa11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 KIAA0100Q14667 2235 aaKnown RBP11.9□□□□□ -0.5
KCNMA1-225ENST00000626620 ZBTB42B2RXF5 422 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 LYPLA2O95372 231 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 STK38Q15208 465 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 SIP14410 1827 aa11.9□□□□□ -0.51
KCNMA1-225ENST00000626620 SORBS3O60504 671 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SDF4Q9BRK5 362 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 COL6A3P12111 3177 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SLC26A4O43511 780 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 CMA1P23946 247 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 RPA1P27694 616 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SFNP31947 248 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 DISC1Q9NRI5 854 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 GRIN2DO15399 1336 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 HIC1Q14526 733 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 U2AF1L4Q8WU68 220 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 SPATA33Q96N06 139 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 RGL1Q9NZL6 768 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
KCNMA1-225ENST00000626620 WDR64B1ANS9 1081 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 TCF7P36402 384 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 JAK3P52333 1124 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 PLPPR4Q7Z2D5 763 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 SEPT1Q8WYJ6 367 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 BLOC1S4Q9NUP1 217 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 PGK1P00558 417 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 F2P00734 622 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 COL6A1P12109 1028 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 LRRC41Q15345 812 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 ANKLE1Q8NAG6 615 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 DYDC2Q96IM9 177 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 MTRQ99707 1265 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 H0YGN5 161 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 MSCO60682 206 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 MUTP22033 750 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 PSMC6P62333 389 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 BEX3Q00994 111 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-225ENST00000626620 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 ZBTB39O15060 712 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 LGALS2P05162 132 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 ADAM17P78536 824 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 FSCN1Q16658 493 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 RARBP10826 455 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 L1TD1Q5T7N2 865 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 C4orf19Q8IY42 314 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 MLXIPQ9HAP2 919 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 PDLIM7Q9NR12 457 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 TRIP12Q14669 1992 aaPredicted RBP11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 ANO5Q75V66 913 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
KCNMA1-225ENST00000626620 CHMP2AO43633 222 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 NDUFA8P51970 172 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 MIER3Q7Z3K6 550 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
KCNMA1-225ENST00000626620 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms