RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
TCF4-254ENST00000626584 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
TCF4-254ENST00000626584 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 F5H6K3 240 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 CES2O00748 559 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 EYA4O95677 639 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 NDUFB10O96000 172 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 KRT18P05783 430 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 MYBL2P10244 700 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 TNNT3P45378 269 aaPredicted RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 SETQ01105 290 aaPredicted RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 KLRC3Q07444 240 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 TRAF1Q13077 416 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 NNTQ13423 1086 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 ASIC2Q16515 512 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 NFIL3Q16649 462 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 POTEGQ6S5H5 508 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 FLAD1Q8NFF5 587 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 FBXL5Q9UKA1 691 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 HDAC9Q9UKV0 1011 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
TCF4-254ENST00000626584 BZW2Q9Y6E2 419 aaKnown RBP11.02□□□□□ -0.65
TCF4-254ENST00000626584 SPDYE3A6NKU9 549 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 RNF40O75150 1001 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 SLURP2P0DP57 97 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 BMP3P12645 472 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 GAP43P17677 238 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 NR2F2P24468 414 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 HOXD13P35453 343 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 ABCB5Q2M3G0 1257 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 PRR16Q569H4 304 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 STYK1Q6J9G0 422 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 SFR1Q86XK3 245 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 COL23A1Q86Y22 540 aaPredicted RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 CNPY4Q8N129 248 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 RBBP6Q7Z6E9 1792 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 PSME4Q14997 1843 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 GTPBP10A4D1E9 387 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 FAM86B1E9PN63 330 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 AGPSO00116 658 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 TULP2O00295 520 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 OPLAHO14841 1288 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 MSH4O15457 936 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 TRIM37O94972 964 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 AFPP02771 609 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 IVLP07476 585 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 FAM86B2P0C5J1 330 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 MUTP22033 750 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 PRKCIP41743 596 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 EPHB4P54760 987 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 PSMC6P62333 389 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 KLHL30Q0D2K2 578 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 RAPGEF1Q13905 1077 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 SLC15A2Q16348 729 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 SHROOM1Q2M3G4 852 aaPredicted RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 EMBQ6PCB8 327 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 IRF2BP2Q7Z5L9 587 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 TBC1D5Q92609 795 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 DBNDD1Q9H9R9 158 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 KCNQ5Q9NR82 932 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 STIM2Q9P246 746 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 ARMCX3Q9UH62 379 aaPredicted RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 DMGDHQ9UI17 866 aaKnown RBP11.01□□□□□ -0.65
TCF4-254ENST00000626584 NENFQ9UMX5 172 aa11.01□□□□□ -0.65
TCF4-254ENST00000626584 A0A087X0T9 212 aa11□□□□□ -0.65
TCF4-254ENST00000626584 FAM196BA6NMK8 535 aa11□□□□□ -0.65
TCF4-254ENST00000626584 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
TCF4-254ENST00000626584 NCK2O43639 380 aa11□□□□□ -0.65
TCF4-254ENST00000626584 ECE2O60344 883 aa11□□□□□ -0.65
TCF4-254ENST00000626584 FAM228BP0C875 321 aa11□□□□□ -0.65
TCF4-254ENST00000626584 EPS15P42566 896 aa11□□□□□ -0.65
TCF4-254ENST00000626584 CASP5P51878 434 aa11□□□□□ -0.65
TCF4-254ENST00000626584 TCP10Q12799 353 aa11□□□□□ -0.65
TCF4-254ENST00000626584 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.65
TCF4-254ENST00000626584 EPHA7Q15375 998 aa11□□□□□ -0.65
TCF4-254ENST00000626584 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms