RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PCYT2Q99447 389 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 SEMA6BQ9H3T3 888 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 STXBP5LQ9Y2K9 1186 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 CYP3A7-CYP3A51PA0A087WV96 503 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 MBLAC1A4D2B0 266 aaPredicted RBP25.35■■□□□ 1.65
SF1-220ENST00000626028 RSPH10B2B2RC85 870 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 CTDNEP1O95476 244 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 RSPH10BP0C881 870 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 CYP3A7P24462 503 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 THPOP40225 353 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 GPNMBQ14956 572 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 FAM160B1Q5W0V3 765 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 ABHD15Q6UXT9 468 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 TBCKQ8TEA7 893 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 WNT8BQ93098 351 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 LENG9Q96B70 501 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 TIFAQ96CG3 184 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 RIT2Q99578 217 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 ORC3Q9UBD5 711 aaPredicted RBP25.35■■□□□ 1.65
SF1-220ENST00000626028 MSRAQ9UJ68 235 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 EVPLQ92817 2033 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 LOXHD1Q8IVV2 1947 aa25.35■■□□□ 1.65
SF1-220ENST00000626028 ABHD14A-ACY1A0A1B0GW23 586 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 ZBBXA8MT70 800 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 NBNO60934 754 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 ATP2A2P16615 1042 aaKnown RBP25.34■■□□□ 1.65
SF1-220ENST00000626028 NONOQ15233 471 aaKnown RBP eCLIP25.34■■□□□ 1.651e-6■■■■■ 28.9
SF1-220ENST00000626028 GRIK4Q16099 956 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 MIS18BP1Q6P0N0 1132 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 AIFM3Q96NN9 605 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 PBX4Q9BYU1 374 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 TUBE1Q9UJT0 475 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 SIP14410 1827 aa25.34■■□□□ 1.65
SF1-220ENST00000626028 CCNE2O96020 404 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 MARK3P27448 753 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 RBM25P49756 843 aaKnown RBP25.33■■□□□ 1.65
SF1-220ENST00000626028 Q4G0T1 1027 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 FAM26DQ5JW98 314 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 RSPH3Q86UC2 560 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 LIMCH1Q9UPQ0 1083 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 PCDHA11Q9Y5I1 949 aa25.33■■□□□ 1.65
SF1-220ENST00000626028 TTYH1Q9H313 450 aaPredicted RBP25.32■■□□□ 1.64
SF1-220ENST00000626028 CHD9Q3L8U1 2897 aa25.32■■□□□ 1.64
SF1-220ENST00000626028 EDIL3O43854 480 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 INSRRP14616 1297 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 KCNJ6P48051 423 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 IKBKEQ14164 716 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 MBOAT7Q96N66 472 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 GUCD1Q96NT3 240 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 NAP1L4Q99733 375 aaKnown RBP25.31■■□□□ 1.64
SF1-220ENST00000626028 TRPC6Q9Y210 931 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 PCDHA10Q9Y5I2 948 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 COL1A2P08123 1366 aa25.31■■□□□ 1.64
SF1-220ENST00000626028 POTEB3A0JP26 581 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 GRXCR1A8MXD5 290 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 BACH1O14867 736 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 MSH4O15457 936 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 HBP1O60381 514 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 PSAPP07602 524 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 SFNP31947 248 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 MBTPS1Q14703 1052 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 PLCB4Q15147 1175 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 MARCH8Q5T0T0 291 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 POTEBQ6S5H4 581 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 NECAB1Q8N987 351 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 NSUN7Q8NE18 718 aaKnown RBP25.3■■□□□ 1.64
SF1-220ENST00000626028 SLC5A5Q92911 643 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 ZNF576Q9H609 170 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 BRMS1Q9HCU9 246 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 ZNF302Q9NR11 478 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 KCNJ14Q9UNX9 436 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 MAFBQ9Y5Q3 323 aaPredicted RBP25.3■■□□□ 1.64
SF1-220ENST00000626028 CDH23Q9H251 3354 aa25.3■■□□□ 1.64
SF1-220ENST00000626028 CCDC194A0A1B0GVG4 234 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 WDR64B1ANS9 1081 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 DDX39AO00148 427 aaKnown RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 LARGE1O95461 756 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 FDPSP14324 419 aaKnown RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 GCFC2P16383 781 aaKnown RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 PLEKHG4Q58EX7 1191 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 PPP4R3AQ6IN85 833 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 FAM43BQ6ZT52 329 aaPredicted RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 CCDC60Q8IWA6 550 aaPredicted RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 RDM1Q8NG50 284 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 ATP8B4Q8TF62 1192 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 ZSCAN31Q96LW9 406 aaPredicted RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 KIF2CQ99661 725 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 LLPHQ9BRT6 129 aaKnown RBP25.29■■□□□ 1.64
SF1-220ENST00000626028 PCDHA2Q9Y5H9 948 aa25.29■■□□□ 1.64
SF1-220ENST00000626028 KIF28PB7ZC32 967 aa25.28■■□□□ 1.64
SF1-220ENST00000626028 PBX2P40425 430 aa25.28■■□□□ 1.64
SF1-220ENST00000626028 PDXDC2PQ6P474 469 aa25.28■■□□□ 1.64
SF1-220ENST00000626028 APBB2Q92870 758 aa25.28■■□□□ 1.64
SF1-220ENST00000626028 CDX2Q99626 313 aaPredicted RBP25.28■■□□□ 1.64
SF1-220ENST00000626028 SLC28A3Q9HAS3 691 aa25.28■■□□□ 1.64
SF1-220ENST00000626028 UPF2Q9HAU5 1272 aaKnown RBP25.28■■□□□ 1.64
SF1-220ENST00000626028 SH2B1Q9NRF2 756 aaPredicted RBP25.28■■□□□ 1.64
SF1-220ENST00000626028 GAS7O60861 476 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 JAK3P52333 1124 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 WDR5P61964 334 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms