RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MAMDC4Q6UXC1 1216 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 TMC5Q6UXY8 1006 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 PPIL6Q8IXY8 311 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 LRRC47Q8N1G4 583 aaKnown RBP5.13□□□□□ -1.59
VBP1-204ENST00000625964 TMEM145Q8NBT3 493 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 CCDC140Q96MF4 163 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 AURKAIP1Q9NWT8 199 aaPredicted RBP5.13□□□□□ -1.59
VBP1-204ENST00000625964 PFDN2Q9UHV9 154 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 MAFKO60675 156 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 KNG1P01042 644 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 C1SP09871 688 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 ACRV1P26436 265 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 RAC3P60763 192 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 KCNAB2Q13303 367 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 SERINC3Q13530 473 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 RASGRF1Q13972 1273 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 SOGA3Q5TF21 947 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 SPATC1Q76KD6 591 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 NLRP10Q86W26 655 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 KCTD13Q8WZ19 329 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 DIO2Q92813 273 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 DEPDC7Q96QD5 511 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 AGAP2Q99490 1192 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 AARSD1Q9BTE6 412 aaKnown RBP5.13□□□□□ -1.59
VBP1-204ENST00000625964 KATNBL1Q9H079 304 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 CCDC113Q9H0I3 377 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 DMRT1Q9Y5R6 373 aa5.13□□□□□ -1.59
VBP1-204ENST00000625964 PRODHO43272 600 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 FBLP22087 321 aaKnown RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 VASNQ6EMK4 673 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 CYP4F22Q6NT55 531 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 CCDC103Q8IW40 242 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 TRIM48Q8IWZ4 208 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 DTX3Q8N9I9 347 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 KREMEN2Q8NCW0 462 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 TTLL11Q8NHH1 800 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 IL17DQ8TAD2 202 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 ZNF483Q8TF39 744 aaPredicted RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 LARP4BQ92615 738 aaKnown RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 SRPK1Q96SB4 655 aaKnown RBP5.12□□□□□ -1.59
VBP1-204ENST00000625964 SPATA9Q9BWV2 254 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 SMOC1Q9H4F8 434 aa5.12□□□□□ -1.59
VBP1-204ENST00000625964 TRAV20A0A0B4J274 112 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 FBXO21O94952 628 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 LTBRP36941 435 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 MAP4K2Q12851 820 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 IFRD2Q12894 506 aaPredicted RBP5.11□□□□□ -1.59
VBP1-204ENST00000625964 RASA3Q14644 834 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 USP10Q14694 798 aaKnown RBP5.11□□□□□ -1.59
VBP1-204ENST00000625964 CSRP2Q16527 193 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 ACBD5Q5T8D3 534 aaPredicted RBP5.11□□□□□ -1.59
VBP1-204ENST00000625964 DENND5AQ6IQ26 1287 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 C1orf159Q96HA4 380 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 DRC1Q96MC2 740 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 ZNF703Q9H7S9 590 aaPredicted RBP5.11□□□□□ -1.59
VBP1-204ENST00000625964 MSL2Q9HCI7 577 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 SNTG2Q9NY99 539 aa5.11□□□□□ -1.59
VBP1-204ENST00000625964 FAM221BA6H8Z2 402 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 DLX3O60479 287 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 DIAPH1O60610 1272 aaKnown RBP5.1□□□□□ -1.59
VBP1-204ENST00000625964 RAMP2O60895 175 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 CAPNS1P04632 268 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 FGFR1P11362 822 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 PABPC1P11940 636 aaKnown RBP5.1□□□□□ -1.59
VBP1-204ENST00000625964 SLC35F1Q5T1Q4 408 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 FNDC7Q5VTL7 733 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 YOD1Q5VVQ6 348 aaPredicted RBP5.1□□□□□ -1.59
VBP1-204ENST00000625964 NSMFQ6X4W1 530 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 USP53Q70EK8 1073 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 MMRN2Q9H8L6 949 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 MYOTQ9UBF9 498 aa5.1□□□□□ -1.59
VBP1-204ENST00000625964 ARNTLO00327 626 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 DGKIO75912 1065 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 LCP1P13796 627 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 CR2P20023 1033 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 LSAMPQ13449 338 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 TESK1Q15569 626 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 GPR155Q7Z3F1 870 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 PROSER1Q86XN7 944 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 ULK2Q8IYT8 1036 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 RCBTB1Q8NDN9 531 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.09□□□□□ -1.59
VBP1-204ENST00000625964 CHAMP1Q96JM3 812 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 CDC6Q99741 560 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 OSBPL2Q9H1P3 480 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 EPB41L1Q9H4G0 881 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 OAZ3Q9UMX2 235 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 PCDHA2Q9Y5H9 948 aa5.09□□□□□ -1.59
VBP1-204ENST00000625964 KDM2BQ8NHM5 1336 aa5.08□□□□□ -1.6
VBP1-204ENST00000625964 BMS1Q14692 1282 aaKnown RBP5.08□□□□□ -1.6
VBP1-204ENST00000625964 LRP10Q7Z4F1 713 aa5.08□□□□□ -1.6
VBP1-204ENST00000625964 UBXN4Q92575 508 aa5.08□□□□□ -1.6
VBP1-204ENST00000625964 OSBP2Q969R2 916 aa5.08□□□□□ -1.6
VBP1-204ENST00000625964 CARD11Q9BXL7 1154 aa5.08□□□□□ -1.6
VBP1-204ENST00000625964 ASH2LQ9UBL3 628 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms