RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ZNF76P36508 570 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 GUCY1B3Q02153 619 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 HIC1Q14526 733 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 PKN1Q16512 942 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 TRAF7Q6Q0C0 670 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 BICD2Q8TD16 824 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 CHAMP1Q96JM3 812 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 C8orf76Q96K31 380 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
PNKP-217ENST00000625216 SETD4Q9NVD3 440 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 ERAP1Q9NZ08 941 aa14.35□□□□□ -0.11
PNKP-217ENST00000625216 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 TREHO43280 583 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 NBNO60934 754 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 CYP3A4P08684 503 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 THPOP40225 353 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 KCNJ6P48051 423 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 ADAM17P78536 824 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 ARHGAP4P98171 946 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 RESTQ13127 1097 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 IKBKEQ14164 716 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
PNKP-217ENST00000625216 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 CYP2W1Q8TAV3 490 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 GLG1Q92896 1179 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 WNT8BQ93098 351 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
PNKP-217ENST00000625216 NKX2-4Q9H2Z4 354 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 TMEM260Q9NX78 707 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 SLC9A2Q9UBY0 812 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
PNKP-217ENST00000625216 TELO2Q9Y4R8 837 aa14.34□□□□□ -0.11
PNKP-217ENST00000625216 H3BQV1 296 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 LGR5O75473 907 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 ARP10275 920 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 HERC6Q8IVU3 1022 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
PNKP-217ENST00000625216 MAFAQ8NHW3 353 aaPredicted RBP14.33□□□□□ -0.12
PNKP-217ENST00000625216 CRYGNQ8WXF5 182 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 PGBD1Q96JS3 809 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
PNKP-217ENST00000625216 PKD2L1Q9P0L9 805 aa14.33□□□□□ -0.12
PNKP-217ENST00000625216 RRN3P2A6NIE6 340 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
PNKP-217ENST00000625216 RPLP2P05387 115 aaKnown RBP14.32□□□□□ -0.12
PNKP-217ENST00000625216 PDIA4P13667 645 aaKnown RBP14.32□□□□□ -0.12
PNKP-217ENST00000625216 RABGGTBP53611 331 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 KRT40Q6A162 431 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 TAF2Q6P1X5 1199 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 FBXO18Q8NFZ0 1043 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 WASF1Q92558 559 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 A0A0C4DFX4 3053 aa14.32□□□□□ -0.12
PNKP-217ENST00000625216 MYH7BA7E2Y1 1941 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 ATG7O95352 703 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 SLC26A2P50443 739 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 ACTR2P61160 394 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 WDR5P61964 334 aaKnown RBP14.31□□□□□ -0.12
PNKP-217ENST00000625216 SETQ01105 290 aaPredicted RBP14.31□□□□□ -0.12
PNKP-217ENST00000625216 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 NFKBIBQ15653 356 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 PLEKHG4Q58EX7 1191 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 RSPH3Q86UC2 560 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 PLA2G4DQ86XP0 818 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 TBC1D22BQ9NU19 505 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 CDH23Q9H251 3354 aa14.31□□□□□ -0.12
PNKP-217ENST00000625216 MBLAC1A4D2B0 266 aaPredicted RBP14.3□□□□□ -0.12
PNKP-217ENST00000625216 FAM86B1E9PN63 330 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 TLL1O43897 1013 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 FAM86B2P0C5J1 330 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 MYOGP15173 224 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 CIITAP33076 1130 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 STAT5BP51692 787 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 NLRP5P59047 1200 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
PNKP-217ENST00000625216 GRIK4Q16099 956 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 FOXD4L6Q3SYB3 417 aaPredicted RBP14.3□□□□□ -0.12
PNKP-217ENST00000625216 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 FOXD4L3Q6VB84 417 aaPredicted RBP14.3□□□□□ -0.12
PNKP-217ENST00000625216 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 SEPT8Q92599 483 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 PCYT2Q99447 389 aa14.3□□□□□ -0.12
PNKP-217ENST00000625216 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms