RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 PBX4Q9BYU1 374 aa6.76□□□□□ -1.33
LINC00963-215ENST00000622972 NKX2-4Q9H2Z4 354 aa6.76□□□□□ -1.33
LINC00963-215ENST00000622972 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
LINC00963-215ENST00000622972 SLC12A7Q9Y666 1083 aa6.76□□□□□ -1.33
LINC00963-215ENST00000622972 GRIN2DO15399 1336 aa6.76□□□□□ -1.33
LINC00963-215ENST00000622972 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 SORBS3O60504 671 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 CCNYL3P0C7X3 344 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 ATP2A2P16615 1042 aaKnown RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 CTHP32929 405 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RABGGTBP53611 331 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RCAN1P53805 252 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 GHRHRQ02643 423 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RABEP1Q15276 862 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 CCDC85BQ15834 202 aaPredicted RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 PTGISQ16647 500 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RTN1Q16799 776 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 LY6KQ17RY6 165 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 CCDC155Q8N6L0 562 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 NSUN7Q8NE18 718 aaKnown RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 AFG1LQ8WV93 481 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 ZNF274Q96GC6 653 aaPredicted RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 COL25A1Q9BXS0 654 aaPredicted RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 WNT8AQ9H1J5 351 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
LINC00963-215ENST00000622972 PCDHA1Q9Y5I3 950 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 DNAH12Q6ZR08 3092 aa6.75□□□□□ -1.33
LINC00963-215ENST00000622972 TCHHQ07283 1943 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 A6NJR5 290 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 STXBP3O00186 592 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 ZBTB5O15062 677 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 ZBTB24O43167 697 aaPredicted RBP6.74□□□□□ -1.33
LINC00963-215ENST00000622972 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
LINC00963-215ENST00000622972 ARIH2O95376 493 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 NR3C2P08235 984 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 PFKMP08237 780 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 MMP3P08254 477 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 IFNAR1P17181 557 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 EDNRBP24530 442 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 KCNJ6P48051 423 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
LINC00963-215ENST00000622972 TRAF1Q13077 416 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 BFSP2Q13515 415 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 DGKDQ16760 1214 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 NFRKBQ6P4R8 1299 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 CCDC83Q8IWF9 413 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 DHX37Q8IY37 1157 aaKnown RBP6.74□□□□□ -1.33
LINC00963-215ENST00000622972 C7orf31Q8N865 590 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 IL31RAQ8NI17 732 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 CTCFLQ8NI51 663 aaPredicted RBP6.74□□□□□ -1.33
LINC00963-215ENST00000622972 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 IWS1Q96ST2 819 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 PXMP2Q9NR77 195 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 EVA1BQ9NVM1 165 aa6.74□□□□□ -1.33
LINC00963-215ENST00000622972 GBF1Q92538 1859 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 KIF28PB7ZC32 967 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 GCOM1H8Y6P7 765 aaPredicted RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 MEIS2O14770 477 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 IQCF3P0C7M6 154 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 POLR2MP0CAP2 368 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 MYOGP15173 224 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 SMARCA1P28370 1054 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 CCND2P30279 289 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 HOXA13P31271 388 aaPredicted RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 RFC2P35250 354 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 LAMC2Q13753 1193 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 UBE2SQ16763 222 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 CCDC62Q6P9F0 684 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 TMTC2Q8N394 836 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 TMX3Q96JJ7 454 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 SPATA33Q96N06 139 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 KATNAL1Q9BW62 490 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 MAF1Q9H063 256 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 CERS4Q9HA82 394 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 NAP1L2Q9ULW6 460 aaPredicted RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 YBX2Q9Y2T7 364 aaKnown RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 V9GY48 417 aaPredicted RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 RANBP2P49792 3224 aaKnown RBP6.73□□□□□ -1.33
LINC00963-215ENST00000622972 FRMPD4Q14CM0 1322 aa6.73□□□□□ -1.33
LINC00963-215ENST00000622972 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
LINC00963-215ENST00000622972 ARID2Q68CP9 1835 aa6.72□□□□□ -1.33
LINC00963-215ENST00000622972 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
LINC00963-215ENST00000622972 M0R2N6 131 aa6.72□□□□□ -1.33
LINC00963-215ENST00000622972 NOP56O00567 594 aaKnown RBP6.72□□□□□ -1.33
LINC00963-215ENST00000622972 WNT7AO00755 349 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms