RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TAF12Q16514 161 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 H7C0C1 242 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ATP5OP48047 213 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 PEX3P56589 373 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 FAM133BQ5BKY9 247 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 FMO2Q99518 471 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 CEP72Q9P209 647 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TRIM10Q9UDY6 481 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 UTYO14607 1347 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ZC3H13Q5T200 1668 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TSNAXIP1Q2TAA8 658 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TCP11Q8WWU5 503 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 RCAN1P53805 252 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 E2F5Q15329 346 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TMED2Q15363 201 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 SPATS2Q86XZ4 545 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 HPS5Q9UPZ3 1129 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ZNF185O15231 689 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ADGRF4Q8IZF3 695 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 NSUN4Q96CB9 384 aaKnown RBP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ANAPC5Q9UJX4 755 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 CRCPO75575 148 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.49■□□□□ 0.39
GABRB3-215ENST00000622697 OSBPL9Q96SU4 736 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 PPP1R16BQ96T49 567 aa17.49■□□□□ 0.39
GABRB3-215ENST00000622697 RNF8O76064 485 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 NR3C1P04150 777 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 CRKP46108 304 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 LRRC8CQ8TDW0 803 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 PHF20Q9BVI0 1012 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 RNF169Q8NCN4 708 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 SLC7A3Q8WY07 619 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 DCAF15Q66K64 600 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 TMC4Q7Z404 712 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 NRBP2Q9NSY0 501 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 SNX24Q9Y343 169 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 H0YCG3 227 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 INO80B-WBP1J3KQ70 363 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 SAT1P21673 171 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 GPSM2P81274 684 aa17.48■□□□□ 0.39
GABRB3-215ENST00000622697 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 INO80BQ9C086 356 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-215ENST00000622697 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 TADA3O75528 432 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 ACSL3O95573 720 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 ZNF211Q13398 564 aaPredicted RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 MICAL1Q8TDZ2 1067 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 WHAMMQ8TF30 809 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 RPSAP08865 295 aaKnown RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 VSNL1P62760 191 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 ARHGAP42A6NI28 874 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 GCLMP48507 274 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 BPIFB4P59827 614 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 EAPPQ56P03 285 aaPredicted RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 MMP10P09238 476 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 EMBQ6PCB8 327 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 HAUS1Q96CS2 278 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 MED10Q9BTT4 135 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 CLTCQ00610 1675 aaKnown RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 CSF1RP07333 972 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 AKR1B1P15121 316 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 POLR2BP30876 1174 aaKnown RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
GABRB3-215ENST00000622697 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 TRIM50Q86XT4 487 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 PLA2G12BQ9BX93 195 aa17.47■□□□□ 0.39
GABRB3-215ENST00000622697 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-215ENST00000622697 A0A1B0GTH6 734 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 KRT1P04264 644 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms