RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 DCXO43602 365 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 ALADP13716 330 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 ITGB5P18084 799 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 TMEM62Q0P6H9 643 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 FBXO47Q5MNV8 452 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 MARCH8Q5T0T0 291 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 TAF2Q6P1X5 1199 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 SRBD1Q8N5C6 995 aaKnown RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 GLG1Q92896 1179 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 FAM49AQ9H0Q0 323 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 AGO3Q9H9G7 860 aaKnown RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 ALG13Q9NP73 1137 aaKnown RBP12.59□□□□□ -0.39
LINC00963-214ENST00000622680 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 POTEB3A0JP26 581 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 MBLAC1A4D2B0 266 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 ENPP3O14638 875 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 PRC1O43663 620 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 CD52P31358 61 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 KIF5BP33176 963 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 IRS1P35568 1242 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 BMPR1AP36894 532 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 MRPS6P82932 125 aaKnown RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 POTEBQ6S5H4 581 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 ADHFE1Q8IWW8 467 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 GIMAP8Q8ND71 665 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 ZNF689Q96CS4 500 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 IGFLR1Q9H665 355 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 MRPL42Q9Y6G3 142 aaKnown RBP12.58□□□□□ -0.4
LINC00963-214ENST00000622680 VPS13AQ96RL7 3174 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 ARID2Q68CP9 1835 aa12.58□□□□□ -0.4
LINC00963-214ENST00000622680 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-214ENST00000622680 MBTPS2O43462 519 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 MMP1P03956 469 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 IBSPP21815 317 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-214ENST00000622680 GATMP50440 423 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 MTMR1Q13613 665 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 CAMK1Q14012 370 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
LINC00963-214ENST00000622680 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 TSHZ1Q6ZSZ6 1077 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 ADGRD2Q7Z7M1 963 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 RSPH3Q86UC2 560 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 ALYREFQ86V81 257 aaKnown RBP12.57□□□□□ -0.4
LINC00963-214ENST00000622680 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 SEPT1Q8WYJ6 367 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 MAP4K1Q92918 833 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 PCYT2Q99447 389 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 MAP3K14Q99558 947 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 PSTPIP2Q9H939 334 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 PRKAG3Q9UGI9 489 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 FAM50BQ9Y247 325 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 RWDD3Q9Y3V2 267 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 UBIAD1Q9Y5Z9 338 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 WDR87Q6ZQQ6 2873 aa12.57□□□□□ -0.4
LINC00963-214ENST00000622680 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 DGKIO75912 1065 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 RB1P06400 928 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 INSRRP14616 1297 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 DNAJB1P25685 340 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 HFE2Q6ZVN8 426 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 HEATR3Q7Z4Q2 680 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 RTN4RL1Q86UN2 441 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-214ENST00000622680 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 PGBD1Q96JS3 809 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 SMARCAD1Q9H4L7 1026 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 MUTYHQ9UIF7 546 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 TRPC6Q9Y210 931 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 PCDHGC5Q9Y5F6 944 aa12.56□□□□□ -0.4
LINC00963-214ENST00000622680 TDRD15B5MCY1 1934 aaKnown RBP12.55□□□□□ -0.4
LINC00963-214ENST00000622680 SPDYE3A6NKU9 549 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 ITGB1P05556 798 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
LINC00963-214ENST00000622680 SMAD4Q13485 552 aaKnown RBP12.55□□□□□ -0.4
LINC00963-214ENST00000622680 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 MICU3Q86XE3 530 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
LINC00963-214ENST00000622680 SLC9A2Q9UBY0 812 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 CD207Q9UJ71 328 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 PLAGL2Q9UPG8 496 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms