RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 EPHB6O15197 1021 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 BCRP11274 1271 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 GAP43P17677 238 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 HERVK_113P62684 666 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 GHRHRQ02643 423 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 NEK11Q8NG66 645 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 PIGOQ8TEQ8 1089 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 CLEC4DQ8WXI8 215 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 RIT2Q99578 217 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 OLFML3Q9NRN5 406 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 RPTORQ8N122 1335 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 PDXKO00764 312 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 FLOT1O75955 427 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 LMNB1P20700 586 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 NR2F2P24468 414 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 CPXCR1Q8N123 301 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 ZFP91Q96JP5 570 aaPredicted RBP15.43■□□□□ 0.06
EPB42-210ENST00000622454 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 UNC45AQ9H3U1 944 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 MAP3K20Q9NYL2 800 aaKnown RBP15.43■□□□□ 0.06
EPB42-210ENST00000622454 GUCA1BQ9UMX6 200 aa15.43■□□□□ 0.06
EPB42-210ENST00000622454 ALAS1P13196 640 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 ITGB5P18084 799 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 VCAM1P19320 739 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 USP14P54578 494 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 MTMR2Q13614 643 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 EPHA7Q15375 998 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 BMT2Q1RMZ1 405 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 FBXO38Q6PIJ6 1188 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 B3GNT9Q6UX72 402 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 SAMD3Q8N6K7 520 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 CCDC42Q96M95 316 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 NAPGQ99747 312 aaPredicted RBP15.42■□□□□ 0.06
EPB42-210ENST00000622454 COL20A1Q9P218 1284 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
EPB42-210ENST00000622454 KRT86O43790 486 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 MYBP10242 640 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 NBPF12Q5TAG4 269 aaPredicted RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 C1orf186Q6ZWK4 172 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 NIPA1Q7RTP0 329 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 CACNA2D4Q7Z3S7 1137 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 ARID3AQ99856 593 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 RAVER2Q9HCJ3 691 aaKnown RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 KCND2Q9NZV8 630 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 CDC23Q9UJX2 597 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 PPP1R9AQ9ULJ8 1098 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 PRPF6O94906 941 aaKnown RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 GCNT3O95395 438 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 HOXD13P35453 343 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 DGKZQ13574 1117 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 ANGEL2Q5VTE6 544 aaKnown RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 BAP1Q92560 729 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 KCNH7Q9NS40 1196 aa15.41■□□□□ 0.06
EPB42-210ENST00000622454 TYW1Q9NV66 732 aaKnown RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
EPB42-210ENST00000622454 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 FAM13AO94988 1023 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 FDX1P10109 184 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 SPA17Q15506 151 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 GPC2Q8N158 579 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 NEK9Q8TD19 979 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 TRPM4Q8TD43 1214 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 NUCKS1Q9H1E3 243 aaKnown RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 HOMER2Q9NSB8 354 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 CEP72Q9P209 647 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 TRIM10Q9UDY6 481 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 FRMPD4Q14CM0 1322 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 ZBTB39O15060 712 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 EIF3DO15371 548 aaKnown RBP eCLIP15.4■□□□□ 0.06
EPB42-210ENST00000622454 H2AFXP16104 143 aaPredicted RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 EPS15P42566 896 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 SPP2Q13103 211 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 MUM1L1Q5H9M0 696 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 LXNQ9BS40 222 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
EPB42-210ENST00000622454 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
EPB42-210ENST00000622454 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
EPB42-210ENST00000622454 ZBED4O75132 1171 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms