RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
FMR1-220ENST00000621987 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
FMR1-220ENST00000621987 PCDHA10Q9Y5I2 948 aa14.36□□□□□ -0.11
FMR1-220ENST00000621987 MCM3APO60318 1980 aa14.36□□□□□ -0.11
FMR1-220ENST00000621987 SYNGAP1Q96PV0 1343 aa14.36□□□□□ -0.11
FMR1-220ENST00000621987 THSD7BQ9C0I4 1608 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 PVALEFA0A1B0GWK0 134 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
FMR1-220ENST00000621987 ATG7O95352 703 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 ARIH2O95376 493 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 XRCC6P12956 609 aaKnown RBP eCLIP14.35□□□□□ -0.11
FMR1-220ENST00000621987 CYP11B2P19099 503 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 QARSP47897 775 aaKnown RBP14.35□□□□□ -0.11
FMR1-220ENST00000621987 ACTR2P61160 394 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 ASIC1P78348 528 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 NEDD9Q14511 834 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 KMT5BQ4FZB7 885 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 CT47A1Q5JQC4 288 aaPredicted RBP14.35□□□□□ -0.11
FMR1-220ENST00000621987 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 UNC13DQ70J99 1090 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 CYFIP1Q7L576 1253 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 FBXO16Q8IX29 292 aaPredicted RBP14.35□□□□□ -0.11
FMR1-220ENST00000621987 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
FMR1-220ENST00000621987 NPLOC4Q8TAT6 608 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 DDX12PQ92771 950 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 CFHR5Q9BXR6 569 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 VTA1Q9NP79 307 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 SAMM50Q9Y512 469 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 MGAMO43451 1857 aa14.35□□□□□ -0.11
FMR1-220ENST00000621987 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 SNAI1O95863 264 aaPredicted RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 PSAPP07602 524 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 PSMC5P62195 406 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 EHHADHQ08426 723 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 UGCGQ16739 394 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 ZNF658Q5TYW1 1059 aaPredicted RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 TAPT1Q6NXT6 567 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 EEPD1Q7L9B9 569 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 C4orf19Q8IY42 314 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 PIGOQ8TEQ8 1089 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 GTPBP4Q9BZE4 634 aaKnown RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 BHMT2Q9H2M3 363 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 DBR1Q9UK59 544 aaKnown RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 GJD2Q9UKL4 321 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 FRMD3A2A2Y4 597 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 PPP1R3GB7ZBB8 358 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 ZBTB39O15060 712 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 GGPS1O95749 300 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 IGHA2P01877 340 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 SSBP05455 408 aaKnown RBP eCLIP14.34□□□□□ -0.11
FMR1-220ENST00000621987 SUPT20HL2P0C7V6 817 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 CTGFP29279 349 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 LY6KQ17RY6 165 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 METTL7BQ6UX53 244 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 DYMQ7RTS9 669 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
FMR1-220ENST00000621987 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
FMR1-220ENST00000621987 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 GSTTP1A0A1W2PQM5 241 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 IKBKBO14920 756 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 STBD1O95210 358 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 ERCC5P28715 1186 aaPredicted RBP14.33□□□□□ -0.12
FMR1-220ENST00000621987 MAP2K2P36507 400 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 IRF5Q13568 498 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 GIT2Q14161 759 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 COBLL1Q53SF7 1204 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 CELF3Q5SZQ8 465 aaKnown RBP14.33□□□□□ -0.12
FMR1-220ENST00000621987 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 C1orf186Q6ZWK4 172 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 CCDC47Q96A33 483 aaKnown RBP14.33□□□□□ -0.12
FMR1-220ENST00000621987 RUSC1Q9BVN2 902 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 GABBR1Q9UBS5 961 aa14.33□□□□□ -0.12
FMR1-220ENST00000621987 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
FMR1-220ENST00000621987 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
FMR1-220ENST00000621987 ZNF862O60290 1169 aa14.32□□□□□ -0.12
FMR1-220ENST00000621987 SORBS3O60504 671 aa14.32□□□□□ -0.12
FMR1-220ENST00000621987 DKC1O60832 514 aaKnown RBP eCLIP14.32□□□□□ -0.12
FMR1-220ENST00000621987 TXNP10599 105 aaKnown RBP14.32□□□□□ -0.12
FMR1-220ENST00000621987 RGS2P41220 211 aa14.32□□□□□ -0.12
FMR1-220ENST00000621987 VEGFBP49765 207 aa14.32□□□□□ -0.12
FMR1-220ENST00000621987 PSMD2Q13200 908 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms