RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 RFX7Q2KHR2 1363 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
GGA3-223ENST00000621870 MYL1P05976 194 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 NR3C2P08235 984 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 ITKQ08881 620 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 GOLGA8FQ08AF8 430 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 GOLGA8DPQ0D2H9 430 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 LONRF2Q1L5Z9 754 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 ZNF568Q3ZCX4 644 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 LXNQ9BS40 222 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 PLSCR1O15162 318 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 GFPT2O94808 682 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 PDHBP11177 359 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 EPHX2P34913 555 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 CUL4BQ13620 913 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 KAZNQ674X7 775 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 C16orf86Q6ZW13 317 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 IGDCC4Q8TDY8 1250 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 ZNF512BQ96KM6 892 aaPredicted RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 PARK7Q99497 189 aaKnown RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 SPZ1Q9BXG8 430 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 FAM184BQ9ULE4 1060 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 TAF6LQ9Y6J9 622 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 PHKA2P46019 1235 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 TUBB4BP68371 445 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 HDLBPQ00341 1268 aaKnown RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 DDR1Q08345 913 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 NBPF12Q5TAG4 269 aaPredicted RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 OR6B3Q8NGW1 331 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 STMN4Q9H169 189 aaPredicted RBP10.05□□□□□ -0.8
GGA3-223ENST00000621870 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
GGA3-223ENST00000621870 OATP04181 439 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SFNP31947 248 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 STAT5BP51692 787 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 MXRA7P84157 204 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 C4orf50Q6ZRC1 276 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ZFYVE28Q9HCC9 887 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 RAB20Q9NX57 234 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 FEZ2Q9UHY8 353 aaPredicted RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 MYO9BQ13459 2157 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 POLRMTO00411 1230 aaKnown RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 TUBBP07437 444 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 COPB2P35606 906 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 PSMC5P62195 406 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 EHHADHQ08426 723 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SLFN12LQ6IEE8 588 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 CTAGE3PQ8IX95 158 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 TRIM58Q8NG06 486 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 RSAD2Q8WXG1 361 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 GDAP1L1Q96MZ0 367 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SLC9A2Q9UBY0 812 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SAR1BQ9Y6B6 198 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ECE1P42892 770 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 PSMD2Q13200 908 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 MRFAP1L1Q96HT8 127 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 JPH1Q9HDC5 661 aaPredicted RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 ADARB2Q9NS39 739 aaKnown RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 KCNH4Q9UQ05 1017 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 CTSHP09668 335 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 PPP4CP60510 307 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 BFSP1Q12934 665 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 UNC13DQ70J99 1090 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 FAM133AQ8N9E0 248 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 XXYLT1Q8NBI6 393 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 ENOX1Q8TC92 643 aaKnown RBP10.04□□□□□ -0.8
GGA3-223ENST00000621870 FBF1Q8TES7 1133 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 SLC4A9Q96Q91 983 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 NDST4Q9H3R1 872 aa10.04□□□□□ -0.8
GGA3-223ENST00000621870 BCL9O00512 1426 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 KDM6AO15550 1401 aaPredicted RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 IGSF3O75054 1194 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 CETPP11597 493 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 HPDP32754 393 aaPredicted RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 GCLMP48507 274 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 USP11P51784 963 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 OR6J1Q8NGC5 347 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 GSDMBQ8TAX9 411 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms