RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 RUFY4Q6ZNE9 571 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 TMCO2Q7Z6W1 182 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 DBF4BQ8NFT6 615 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 EDIL3O43854 480 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 CAND2O75155 1236 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 CA3P07451 260 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 NLRP5P59047 1200 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 IKBKEQ14164 716 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 AZI2Q9H6S1 392 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 TPCN1Q9ULQ1 816 aa20.42■□□□□ 0.86
SCAMP4-213ENST00000621748 IPO5O00410 1097 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 DEXIO95424 95 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 SEC24BO95487 1268 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 INSRRP14616 1297 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 CIITAP33076 1130 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 STAT5BP51692 787 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 SCRN1Q12765 414 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 ADGRE1Q14246 886 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 PLCB4Q15147 1175 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 PLEKHG4Q58EX7 1191 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 PLPPR4Q7Z2D5 763 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 ZBTB10Q96DT7 871 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 MICAL3Q7RTP6 2002 aa20.41■□□□□ 0.86
SCAMP4-213ENST00000621748 IGKV6D-21A0A0A0MT36 114 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 MBLAC1A4D2B0 266 aaPredicted RBP20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 DTNBO60941 627 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 ARHGEF15O94989 841 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 IGBP1P78318 339 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 C8orf34Q49A92 452 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 PRR16Q569H4 304 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 FAM26DQ5JW98 314 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 CPLX2Q6PUV4 134 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 ABHD15Q6UXT9 468 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 LENG9Q96B70 501 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 IL17RAQ96F46 866 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 GAS2L1Q99501 681 aaPredicted RBP20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 TUBE1Q9UJT0 475 aa20.4■□□□□ 0.86
SCAMP4-213ENST00000621748 KIF28PB7ZC32 967 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 TLL1O43897 1013 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 EFCAB14O75071 495 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 CHRNA1P02708 482 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 AK2P54819 239 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 MKRN4PQ13434 485 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 NPY5RQ15761 445 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 TAF2Q6P1X5 1199 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 RPAINQ86UA6 219 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 PCDHA4Q9UN74 947 aa20.39■□□□□ 0.85
SCAMP4-213ENST00000621748 MYH9P35579 1960 aaKnown RBP20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 RRN3P2A6NIE6 340 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 PFKFB2O60825 505 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 TAP1Q03518 808 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 CCDC60Q8IWA6 550 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 TRAPPC12Q8WVT3 735 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 DNAJB3Q8WWF6 145 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 TRPC6Q9Y210 931 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 SIP14410 1827 aa20.38■□□□□ 0.85
SCAMP4-213ENST00000621748 WDR81Q562E7 1941 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 LCHNA4D1U4 455 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 M0R2N6 131 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 GJB5O95377 273 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 USP11P51784 963 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 MGAT3Q09327 533 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 BLIDQ8IZY5 108 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 USP38Q8NB14 1042 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 TBCKQ8TEA7 893 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 SEPT8Q92599 483 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 ZBED2Q9BTP6 218 aa20.37■□□□□ 0.85
SCAMP4-213ENST00000621748 TRANK1O15050 2925 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 POTEB3A0JP26 581 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 RFXAPO00287 272 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 BACH1O14867 736 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 SLC26A2P50443 739 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 ANKRD1Q15327 319 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 SWSAP1Q6NVH7 229 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 FAM117BQ6P1L5 589 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 POTEBQ6S5H4 581 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 SPRED2Q7Z698 418 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 RSPH3Q86UC2 560 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 DAGLBQ8NCG7 672 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 TNPO1Q92973 898 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 ZNF302Q9NR11 478 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 KCNJ14Q9UNX9 436 aa20.36■□□□□ 0.85
SCAMP4-213ENST00000621748 EPOPA6NHQ4 379 aa20.35■□□□□ 0.85
SCAMP4-213ENST00000621748 MSH4O15457 936 aa20.35■□□□□ 0.85
SCAMP4-213ENST00000621748 CDKL5O76039 1030 aa20.35■□□□□ 0.85
SCAMP4-213ENST00000621748 ATP4AP20648 1035 aa20.35■□□□□ 0.85
SCAMP4-213ENST00000621748 IGFBP4P22692 258 aa20.35■□□□□ 0.85
SCAMP4-213ENST00000621748 FAM160B1Q5W0V3 765 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms