RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
CDH1-214ENST00000621016 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
CDH1-214ENST00000621016 SERPINB2P05120 415 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
CDH1-214ENST00000621016 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
CDH1-214ENST00000621016 RINLQ6ZS11 566 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
CDH1-214ENST00000621016 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 PSMD14O00487 310 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 EHHADHQ08426 723 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 NFIAQ12857 509 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDH1-214ENST00000621016 DBN1Q16643 649 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 CCDC70Q6NSX1 233 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 FAM228AQ86W67 206 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 ZFPM1Q8IX07 1006 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 FAM133AQ8N9E0 248 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 BICD1Q96G01 975 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.53
CDH1-214ENST00000621016 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
CDH1-214ENST00000621016 PANK4Q9NVE7 773 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.53
CDH1-214ENST00000621016 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 BUB1BO60566 1050 aaPredicted RBP11.71□□□□□ -0.53
CDH1-214ENST00000621016 GNAT1P11488 350 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 ACTN1P12814 892 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 UBXN2AP68543 259 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 PRR16Q569H4 304 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 DBNDD1Q9H9R9 158 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.53
CDH1-214ENST00000621016 CACNA1SQ13698 1873 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 POTEFA5A3E0 1075 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 CHMP2AO43633 222 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 POTEIP0CG38 1075 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 HOXA13P31271 388 aaPredicted RBP11.71□□□□□ -0.54
CDH1-214ENST00000621016 VAV2P52735 878 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 PLS1Q14651 629 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 PDCD2Q16342 344 aaPredicted RBP11.71□□□□□ -0.54
CDH1-214ENST00000621016 SLC30A9Q6PML9 568 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 POTEGQ6S5H5 508 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 GPBP1Q86WP2 473 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 KLHL7Q8IXQ5 586 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 TSG101Q99816 390 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 NUP58Q9BVL2 599 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 RAB34Q9BZG1 259 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.54
CDH1-214ENST00000621016 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 USP21Q9UK80 565 aa11.71□□□□□ -0.54
CDH1-214ENST00000621016 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SMIM24O75264 130 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 GDF11O95390 407 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SEC24CP53992 1094 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 DDR1Q08345 913 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SPATA21Q7Z572 469 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 MYOCDQ8IZQ8 938 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 AK8Q96MA6 479 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 C7orf25Q9BPX7 421 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 JMJD4Q9H9V9 463 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PPP1R11O60927 126 aaPredicted RBP11.7□□□□□ -0.54
CDH1-214ENST00000621016 MYL1P05976 194 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 RHBDL3P58872 404 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SLC5A9Q2M3M2 681 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 FAM26FQ5R3K3 315 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SPZ1Q9BXG8 430 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PACSIN1Q9BY11 444 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 A1CFQ9NQ94 594 aaKnown RBP11.7□□□□□ -0.54
CDH1-214ENST00000621016 PCDHGA4Q9Y5G9 962 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PCDHA1Q9Y5I3 950 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
CDH1-214ENST00000621016 GOLGA6BA6NDN3 693 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 PAFAH1B1P43034 410 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 TRADDQ15628 312 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 TBC1D10BQ4KMP7 808 aaPredicted RBP11.7□□□□□ -0.54
CDH1-214ENST00000621016 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SH2D3CQ8N5H7 860 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
CDH1-214ENST00000621016 LAD1O00515 517 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 CLIC2O15247 247 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 MEFVO15553 781 aaPredicted RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
CDH1-214ENST00000621016 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
CDH1-214ENST00000621016 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms