RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
LITAF-220ENST00000620789 ZNF302Q9NR11 478 aa20.64■□□□□ 0.89
LITAF-220ENST00000620789 SAMM50Q9Y512 469 aa20.64■□□□□ 0.89
LITAF-220ENST00000620789 MARCH6O60337 910 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 NEMFO60524 1076 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
LITAF-220ENST00000620789 PDCP20941 246 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 TRAPPC10P48553 1259 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 HIC1Q14526 733 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 SWSAP1Q6NVH7 229 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 SLFN12Q8IYM2 578 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 RDM1Q8NG50 284 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 NOC4LQ9BVI4 516 aaKnown RBP20.63■□□□□ 0.89
LITAF-220ENST00000620789 DISC1Q9NRI5 854 aa20.63■□□□□ 0.89
LITAF-220ENST00000620789 NOL7Q9UMY1 257 aaKnown RBP20.63■□□□□ 0.89
LITAF-220ENST00000620789 NRCAMQ92823 1304 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 GNAT1P11488 350 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 MCM7P33993 719 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 ZNF200P98182 395 aaPredicted RBP20.62■□□□□ 0.89
LITAF-220ENST00000620789 ORC2Q13416 577 aaPredicted RBP20.62■□□□□ 0.89
LITAF-220ENST00000620789 PLCB4Q15147 1175 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 CALCRLQ16602 461 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 MIER3Q7Z3K6 550 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 FOXD4L1Q9NU39 408 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 VAV3Q9UKW4 847 aa20.62■□□□□ 0.89
LITAF-220ENST00000620789 MAFBQ9Y5Q3 323 aaPredicted RBP20.62■□□□□ 0.89
LITAF-220ENST00000620789 RANBP2P49792 3224 aaKnown RBP20.61■□□□□ 0.89
LITAF-220ENST00000620789 UMODL1Q5DID0 1318 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 IGSF9BQ9UPX0 1349 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 PPFIA1Q13136 1202 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 PTK7Q13308 1070 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 PPP2R5CQ13362 524 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 TTC38Q5R3I4 469 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 MFSD5Q6N075 450 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 PDXDC2PQ6P474 469 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 LMBR1Q8WVP7 490 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 TNPO1Q92973 898 aaKnown RBP20.61■□□□□ 0.89
LITAF-220ENST00000620789 ATP6V0A1Q93050 837 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 PRO3102Q9H379 93 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 GABBR1Q9UBS5 961 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 TRPC6Q9Y210 931 aa20.61■□□□□ 0.89
LITAF-220ENST00000620789 POTEB3A0JP26 581 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 PITPNM1O00562 1244 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 CYP2C18P33260 490 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 BMP8BP34820 402 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 ADAM17P78536 824 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 BFSP2Q13515 415 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 ZNF174Q15697 407 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 GRIK4Q16099 956 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 POTEBQ6S5H4 581 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 CAGE1Q8TC20 777 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 DHX38Q92620 1227 aaKnown RBP20.6■□□□□ 0.89
LITAF-220ENST00000620789 MTMR9Q96QG7 549 aa20.6■□□□□ 0.89
LITAF-220ENST00000620789 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
LITAF-220ENST00000620789 TREHO43280 583 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 INSRRP14616 1297 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 ATP4AP20648 1035 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 TOB1P50616 345 aaPredicted RBP20.59■□□□□ 0.89
LITAF-220ENST00000620789 FPGSQ05932 587 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 SPIRE1Q08AE8 756 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 TMEM199Q8N511 208 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 ATP8B4Q8TF62 1192 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 WNT8AQ9H1J5 351 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 TMEM60Q9H2L4 133 aa20.59■□□□□ 0.89
LITAF-220ENST00000620789 COLQQ9Y215 455 aaPredicted RBP20.59■□□□□ 0.89
LITAF-220ENST00000620789 TRIP12Q14669 1992 aaPredicted RBP20.59■□□□□ 0.89
LITAF-220ENST00000620789 RRN3P2A6NIE6 340 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 EML1O00423 815 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
LITAF-220ENST00000620789 SYT1P21579 422 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 CCL23P55773 120 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 RBL2Q08999 1139 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 NBR1Q14596 966 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 UGCGQ16739 394 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 RILPL1Q5EBL4 403 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 CKAP2LQ8IYA6 745 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 WNT8BQ93098 351 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 UBE2OQ9C0C9 1292 aaKnown RBP20.58■□□□□ 0.89
LITAF-220ENST00000620789 PCDHA12Q9UN75 941 aa20.58■□□□□ 0.89
LITAF-220ENST00000620789 WDR81Q562E7 1941 aa20.58■□□□□ 0.88
LITAF-220ENST00000620789 MYH9P35579 1960 aaKnown RBP20.57■□□□□ 0.88
LITAF-220ENST00000620789 HBP1O60381 514 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 CSF2RAP15509 400 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 TXKP42681 527 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 IGBP1P78318 339 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 TRIM71Q2Q1W2 868 aaKnown RBP20.57■□□□□ 0.88
LITAF-220ENST00000620789 MARCH8Q5T0T0 291 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 RETREG2Q8NC44 543 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 BBXQ8WY36 941 aaPredicted RBP20.57■□□□□ 0.88
LITAF-220ENST00000620789 KAT6AQ92794 2004 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 TANC1Q9C0D5 1861 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
LITAF-220ENST00000620789 TUBE1Q9UJT0 475 aa20.57■□□□□ 0.88
LITAF-220ENST00000620789 MBLAC1A4D2B0 266 aaPredicted RBP20.56■□□□□ 0.88
LITAF-220ENST00000620789 ZNF862O60290 1169 aa20.56■□□□□ 0.88
LITAF-220ENST00000620789 OR52Z1P0C646 297 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms