RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 KRBA2Q6ZNG9 492 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 CATSPER3Q86XQ3 398 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 DHX37Q8IY37 1157 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 SMAP1Q8IYB5 467 aaPredicted RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 PDILTQ8N807 584 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 NEK9Q8TD19 979 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 SNX29Q8TEQ0 813 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 SYAP1Q96A49 352 aaPredicted RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 DHX58Q96C10 678 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 NT5C3AQ9H0P0 336 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 TUFT1Q9NNX1 390 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 RGL1Q9NZL6 768 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 TCEAL9Q9UHQ7 104 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 PCDHA10Q9Y5I2 948 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 GSTTP1A0A1W2PQM5 241 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 NKRFO15226 690 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CTAGE5O15320 804 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 FARP2O94887 1054 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 GH1P01241 217 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 PSAPP07602 524 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 XRCC6P12956 609 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 SMPD1P17405 629 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 PLCG1P19174 1290 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 ADCYAP1R1P41586 468 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 ACTR2P61160 394 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TNFAIP2Q03169 654 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CCDC144BQ3MJ40 725 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 DUSP28Q4G0W2 176 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TMEM119Q4V9L6 283 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 NAALADL2Q58DX5 795 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TMEM63BQ5T3F8 832 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CAVIN1Q6NZI2 390 aaKnown RBP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 MIS18BP1Q6P0N0 1132 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TPH2Q8IWU9 490 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CNNM3Q8NE01 707 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 RASSF8Q8NHQ8 419 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 RAET1EQ8TD07 263 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 SEPT1Q8WYJ6 367 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TRIB2Q92519 343 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 COPS5Q92905 334 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-209ENST00000620393 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CDK5RAP3Q96JB5 506 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 PLIN2Q99541 437 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 CLSTN2Q9H4D0 955 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 BLOC1S4Q9NUP1 217 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 FAM184BQ9ULE4 1060 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 KIAA1024Q9UPX6 916 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 DNM3Q9UQ16 869 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 Q9Y3F1 56 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 SAMM50Q9Y512 469 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 KDM3AQ9Y4C1 1321 aa8.99□□□□□ -0.97
CPNE3-209ENST00000620393 IGKV6D-21A0A0A0MT36 114 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 ADCY3O60266 1144 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 SORBS3O60504 671 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 DKC1O60832 514 aaKnown RBP eCLIP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 LETM1O95202 739 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 LYPLA2O95372 231 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 SUPT20HL2P0C7V6 817 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 STAT6P42226 847 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 QARSP47897 775 aaKnown RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 EMP3P54852 163 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 PSMC5P62195 406 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 ARHGAP1Q07960 439 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 CACNB2Q08289 660 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 CTTNQ14247 550 aaKnown RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 CAMK4Q16566 473 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 KCNK18Q7Z418 384 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 SH3RF1Q7Z6J0 888 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 C4orf19Q8IY42 314 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 CEP57L1Q8IYX8 460 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 TRPV1Q8NER1 839 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 LRRC15Q8TF66 581 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 RAD54LQ92698 747 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 CCDC34Q96HJ3 373 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 SPATA33Q96N06 139 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 NACC1Q96RE7 527 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 GPR20Q99678 358 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 NUP62CLQ9H1M0 184 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 KBTBD4Q9NVX7 518 aa8.98□□□□□ -0.97
CPNE3-209ENST00000620393 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
CPNE3-209ENST00000620393 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms