RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 DNMT3LQ9UJW3 386 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 TTC3P53804 2025 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 F5H6K3 240 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 USP5P45974 858 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 PLCB3Q01970 1234 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 KLRC3Q07444 240 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 NR5A1Q13285 461 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 AP3B2Q13367 1082 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 TRIM60Q495X7 471 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 SYDE2Q5VT97 1194 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 ZNF830Q96NB3 372 aaPredicted RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 OSBPL6Q9BZF3 934 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 TLR7Q9NYK1 1049 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MRPL11Q9Y3B7 192 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MTCH2Q9Y6C9 303 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 ZFP37Q9Y6Q3 630 aaPredicted RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 CYP3A7-CYP3A51PA0A087WV96 503 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 SNAP23O00161 211 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 GDF11O95390 407 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 GH1P01241 217 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MMP3P08254 477 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 CYP3A7P24462 503 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 SLFNL1Q499Z3 407 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 PRAMEF18Q5VWM3 479 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MAFAQ8NHW3 353 aaPredicted RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 ACER1Q8TDN7 264 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 TIFAQ96CG3 184 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 PABPC5Q96DU9 382 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 PTPRDP23468 1912 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 MYH9P35579 1960 aaKnown RBP6.3□□□□□ -1.4
CBWD3-215ENST00000619322 C2orf16Q68DN1 1984 aa6.3□□□□□ -1.4
CBWD3-215ENST00000619322 STK36Q9NRP7 1315 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 H3BNC9 293 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 GAS2O43903 313 aaKnown RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 GNAQP50148 359 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 GALNT17Q6IS24 598 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 TAF2Q6P1X5 1199 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 C7orf61Q8IZ16 206 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 ATG4CQ96DT6 458 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MRPL38Q96DV4 380 aaKnown RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MSLNLQ96KJ4 702 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 COL25A1Q9BXS0 654 aaPredicted RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 OXCT2Q9BYC2 517 aaPredicted RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 CNPY2Q9Y2B0 182 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 UBIAD1Q9Y5Z9 338 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MIA3Q5JRA6 1907 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 RRN3P2A6NIE6 340 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 PPFIA4O75335 1185 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 IQCF3P0C7M6 154 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 SELPP16109 830 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MCMDC2Q4G0Z9 681 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 SLC9C2Q5TAH2 1124 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 SH3PXD2AQ5TCZ1 1133 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 AACSQ86V21 672 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 TMEM174Q8WUU8 243 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 RWDD1Q9H446 243 aaPredicted RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 ANTXR1Q9H6X2 564 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MSRAQ9UJ68 235 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 DOLKQ9UPQ8 538 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 IGSF9BQ9UPX0 1349 aa6.29□□□□□ -1.4
CBWD3-215ENST00000619322 MUC22E2RYF6 1773 aaPredicted RBP6.29□□□□□ -1.4
CBWD3-215ENST00000619322 GPAA1O43292 621 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 SURF6O75683 361 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 MBD4O95243 580 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 DYNLL1P63167 89 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 DSC3Q14574 896 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 FSCN1Q16658 493 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 BRDTQ58F21 947 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 MRPL14Q6P1L8 145 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 MAPKAPK5Q8IW41 473 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 ELNP15502 786 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 HOXA13P31271 388 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 CCL14Q16627 93 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 Q6ZVU0 165 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 MIGA2Q7L4E1 593 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 KAT2BQ92831 832 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 GLT1D1Q96MS3 346 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 TRPV5Q9NQA5 729 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 HSFX1Q9UBD0 423 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 IFIT2P09913 472 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 GNAT1P11488 350 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 DDIT3P35638 169 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 CELF3Q5SZQ8 465 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 VSIG10LQ86VR7 867 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
CBWD3-215ENST00000619322 DHX38Q92620 1227 aaKnown RBP6.28□□□□□ -1.4
CBWD3-215ENST00000619322 CEP295NLQ96MC4 621 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms