RNA–Protein interactions for RNA: ENST00000619038.4

CDRT4-204, CMT1A duplicated region transcript 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT4, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-204ENST00000619038 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 TCERG1LQ5VWI1 586 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 ZC3H18Q86VM9 953 aaKnown RBP12.62□□□□□ -0.39
CDRT4-204ENST00000619038 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 SNRNP27Q8WVK2 155 aaKnown RBP12.62□□□□□ -0.39
CDRT4-204ENST00000619038 HIC2Q96JB3 615 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 RAB3IPQ96QF0 476 aaPredicted RBP12.62□□□□□ -0.39
CDRT4-204ENST00000619038 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 CTTNBP2NLQ9P2B4 639 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 USP20Q9Y2K6 914 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
CDRT4-204ENST00000619038 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 CCDC166P0CW27 439 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 MIIPQ5JXC2 388 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PDXDC2PQ6P474 469 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 IGSF1Q8N6C5 1336 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 TXLNGYQ9BZA5 131 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 LGR6Q9HBX8 967 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 COPRSQ9NQ92 184 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 METTL5Q9NRN9 209 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 INIPQ9NRY2 104 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 RMND1Q9NWS8 449 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 AMACRQ9UHK6 382 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 BARX2Q9UMQ3 279 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 TMEM98Q9Y2Y6 226 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 C4AP0C0L4 1744 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 MED1Q15648 1581 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 MAGEA13PA6NCF6 341 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 ITGA4P13612 1032 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 TIMM10P62072 90 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PTPROQ16827 1216 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PARP6Q2NL67 630 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 MGARPQ8TDB4 240 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
CDRT4-204ENST00000619038 PCDH18Q9HCL0 1135 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 WDR37Q9Y2I8 494 aa12.61□□□□□ -0.39
CDRT4-204ENST00000619038 A0A0J9YVX5 310 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ZBTB43O43298 467 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 E2F6O75461 281 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ASLP04424 464 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 VARSP26640 1264 aaKnown RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 RTP1P59025 263 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 TTLL12Q14166 644 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 KHDC1Q4VXA5 237 aaKnown RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 RNF168Q8IYW5 571 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 PGM2Q96G03 612 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 OXCT2Q9BYC2 517 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 FAM207AQ9NSI2 230 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 NPHP3-ACAD11A0A0J9YXS1 232 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 A0A1W2PQJ5 194 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 A6NJR5 290 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 KCNK3O14649 394 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 TTI1O43156 1089 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ITGA2BP08514 1039 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 KLRC1P26715 233 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 EPHB2P29323 1055 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 NCCRP1Q6ZVX7 275 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 UHMK1Q8TAS1 419 aaKnown RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
CDRT4-204ENST00000619038 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 MLXIPLQ9NP71 852 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 FAM114A2Q9NRY5 505 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
CDRT4-204ENST00000619038 HAO1Q9UJM8 370 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms