RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 GRAMD2AQ8IUY3 354 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 CKAP2LQ8IYA6 745 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 MAGEB6Q8N7X4 407 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ARRDC4Q8NCT1 418 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 RASSF8Q8NHQ8 419 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 SRPK1Q96SB4 655 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 ISCA1Q9BUE6 129 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 BRD9Q9H8M2 597 aa4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 LUC7LQ9NQ29 371 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-233ENST00000618836 TLL1O43897 1013 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 RPS6KB1P23443 525 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 INHBCP55103 352 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CACNB2Q08289 660 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 G3BP1Q13283 466 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TUSC1Q2TAM9 212 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 BNC2Q6ZN30 1099 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CRACR2BQ8N4Y2 399 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TAB3Q8N5C8 712 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 NAXEQ8NCW5 288 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 NUP133Q8WUM0 1156 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 MTRQ99707 1265 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CARD11Q9BXL7 1154 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 WNT5BQ9H1J7 359 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ZBTB3Q9H5J0 574 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 SRA1Q9HD15 236 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ANO2Q9NQ90 1003 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 AASDHPPTQ9NRN7 309 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 MOCS1Q9NZB8 636 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 AGTPBP1Q9UPW5 1226 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 NDUFB9Q9Y6M9 179 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 KCPQ6ZWJ8 1503 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PAPPA2Q9BXP8 1791 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ANO9A1A5B4 782 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 NEBLO76041 1014 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CSPG5O95196 566 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PCNAP12004 261 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PBLDP30039 288 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ARHGAP4P98171 946 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 BBS9Q3SYG4 887 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 C5orf22Q49AR2 442 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TMCO3Q6UWJ1 677 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 OSTM1Q86WC4 334 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TRIM22Q8IYM9 498 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 GJA10Q969M2 543 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 COG3Q96JB2 828 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PARVGQ9HBI0 331 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PPP4R2Q9NY27 417 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TUBGCP4Q9UGJ1 667 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CARD8Q9Y2G2 431 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 TMED5Q9Y3A6 229 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ITGB1P05556 798 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PRKAR1BP31321 381 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 MRPL12P52815 198 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 RRP1P56182 461 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 DAB2P98082 770 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 CDK17Q00537 523 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 BNIP1Q12981 228 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 VARS2Q5ST30 1063 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 OTUD7BQ6GQQ9 843 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 FASTKD5Q7L8L6 764 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 LRP10Q7Z4F1 713 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 PCSK9Q8NBP7 692 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 SMC1BQ8NDV3 1235 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 OR6C4Q8NGE1 309 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 MGARPQ8TDB4 240 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 THUMPD2Q9BTF0 503 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 ABCF3Q9NUQ8 709 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 SLC4A4Q9Y6R1 1079 aa4.51□□□□□ -1.69
UBE2D3-233ENST00000618836 FAM155AB1AL88 458 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 SLC7A4O43246 635 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 MGEA5O60502 916 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 ICMTO60725 284 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 ATP6V1G1O75348 118 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 GFPT2O94808 682 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 XPAP23025 273 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 PLCB3Q01970 1234 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 FMR1Q06787 632 aaKnown RBP eCLIP4.5□□□□□ -1.691e-7■□□□□ 9.5
UBE2D3-233ENST00000618836 STIM1Q13586 685 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 NCOA4Q13772 614 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 VPS53Q5VIR6 699 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 KIAA0319Q5VV43 1072 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 ADALQ6DHV7 355 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 POMZP3Q6PJE2 187 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 CORO6Q6QEF8 472 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 NCCRP1Q6ZVX7 275 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 IQCA1Q86XH1 822 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 HOMER1Q86YM7 354 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 TRMT2AQ8IZ69 625 aaKnown RBP4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 PDCL2Q8N4E4 241 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 OTUD5Q96G74 571 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 PPP1R9BQ96SB3 815 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 RHOBTB2Q9BYZ6 727 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 NDFIP2Q9NV92 336 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 STRIP2Q9ULQ0 834 aa4.5□□□□□ -1.69
UBE2D3-233ENST00000618836 PHF24Q9UPV7 400 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms