RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 FAM213AQ9BRX8 229 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 STAM2O75886 525 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 NR3C2P08235 984 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ELF2Q15723 593 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 GEN1Q17RS7 908 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 SLC10A5Q5PT55 438 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 LMBRD2Q68DH5 695 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 EXOC8Q8IYI6 725 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ANKRD13AQ8IZ07 590 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 TMEM206Q9H813 350 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 MYO1FO00160 1098 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 BNIP3LO60238 219 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 EPHX2P34913 555 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 DSTYKQ6XUX3 929 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 CTAGE3PQ8IX95 158 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 CCDC89Q8N998 374 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 OR6B3Q8NGW1 331 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 BCL9O00512 1426 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 NSMCE1Q8WV22 266 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 GLIS2Q9BZE0 524 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 GOLPH3LQ9H4A5 285 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 ATP6V0A4Q9HBG4 840 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 RIC8AQ9NPQ8 531 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 SH3GLB2Q9NR46 395 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 SPTLC3Q9NUV7 552 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 CD2APQ9Y5K6 639 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 GAS8O95995 478 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 JAK3P52333 1124 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MFAP3P55082 362 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 DPH5Q9H2P9 285 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 ADAMTS1Q9UHI8 967 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 POLR2BP30876 1174 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 RBL2Q08999 1139 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
SMARCA1-205ENST00000617310 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 SPDYE6P0CI01 402 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 BFSP1Q12934 665 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 RASGRP2Q7LDG7 609 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 RNF149Q8NC42 400 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 TIGD1Q96MW7 591 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 EIF2AK1Q9BQI3 630 aaKnown RBP11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 LRRC4Q9HBW1 653 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 PCDHA10Q9Y5I2 948 aa11.02□□□□□ -0.64
SMARCA1-205ENST00000617310 DYNC1I1O14576 645 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC4A1P02730 911 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 TRIM49P0CI25 452 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 TRIM49CP0CI26 452 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 FERP16591 822 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 BIRC2Q13490 618 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 CCDC14Q49A88 953 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 LPAR1Q92633 364 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 RRAGDQ9NQL2 400 aaPredicted RBP11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 VPS18Q9P253 973 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 MAN1A1P33908 653 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 STAT5BP51692 787 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 DYNLT1P63172 113 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 MXRA7P84157 204 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 ZMYND15Q9H091 742 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 JPH1Q9HDC5 661 aaPredicted RBP11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
SMARCA1-205ENST00000617310 UTP11Q9Y3A2 253 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms