RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 RIT2Q99578 217 aa21.33■■□□□ 1.01
SUSD3-205ENST00000617293 NAP1L4Q99733 375 aaKnown RBP21.33■■□□□ 1.01
SUSD3-205ENST00000617293 TEKT3Q9BXF9 490 aa21.33■■□□□ 1.01
SUSD3-205ENST00000617293 NRCAMQ92823 1304 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 IGKV6D-21A0A0A0MT36 114 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 PITPNM1O00562 1244 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 CHMP2AO43633 222 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 GCFC2P16383 781 aaKnown RBP21.32■■□□□ 1
SUSD3-205ENST00000617293 PPFIA1Q13136 1202 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 FAM160B1Q5W0V3 765 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 DHX38Q92620 1227 aaKnown RBP21.32■■□□□ 1
SUSD3-205ENST00000617293 ZNF302Q9NR11 478 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 PCDHA10Q9Y5I2 948 aa21.32■■□□□ 1
SUSD3-205ENST00000617293 TRIOBPQ9H2D6 2365 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 MARCH6O60337 910 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 PSAPP07602 524 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 IQCF3P0C7M6 154 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 HOXC8P31273 242 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 GNL2Q13823 731 aaKnown RBP21.31■■□□□ 1
SUSD3-205ENST00000617293 CCDC60Q8IWA6 550 aaPredicted RBP21.31■■□□□ 1
SUSD3-205ENST00000617293 ETNPPLQ8TBG4 499 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 LMBR1Q8WVP7 490 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 TNPO1Q92973 898 aaKnown RBP21.31■■□□□ 1
SUSD3-205ENST00000617293 IL23AQ9NPF7 189 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 TRPC6Q9Y210 931 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 KIF3AQ9Y496 699 aa21.31■■□□□ 1
SUSD3-205ENST00000617293 WDR64B1ANS9 1081 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 PSMD10O75832 226 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 CKBP12277 381 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 GJB2P29033 226 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 IGBP1P78318 339 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 PLCB4Q15147 1175 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 GRIK4Q16099 956 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 PDXDC2PQ6P474 469 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 C16orf59Q7L2K0 433 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 DEFB128Q7Z7B8 93 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 SERINC5Q86VE9 423 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 RPUSD2Q8IZ73 545 aaKnown RBP21.3■■□□□ 1
SUSD3-205ENST00000617293 AFAP1L1Q8TED9 768 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 WNT8BQ93098 351 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.3■■□□□ 1
SUSD3-205ENST00000617293 FOXP1Q9H334 677 aaPredicted RBP21.3■■□□□ 1
SUSD3-205ENST00000617293 UNC45AQ9H3U1 944 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 DISC1Q9NRI5 854 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 SMC3Q9UQE7 1217 aa21.3■■□□□ 1
SUSD3-205ENST00000617293 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.3■■□□□ 1
SUSD3-205ENST00000617293 MYH9P35579 1960 aaKnown RBP21.29■■□□□ 1
SUSD3-205ENST00000617293 POTEB3A0JP26 581 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 INSRRP14616 1297 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 SELPP16109 830 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 ATP2B1P20020 1258 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 THPOP40225 353 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 SLC26A2P50443 739 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 POTEBQ6S5H4 581 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 ZNF365Q70YC5 407 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 TRMT1LQ7Z2T5 733 aaKnown RBP21.29■■□□□ 1
SUSD3-205ENST00000617293 CKAP2LQ8IYA6 745 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 FAM20AQ96MK3 541 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 GABBR1Q9UBS5 961 aa21.29■■□□□ 1
SUSD3-205ENST00000617293 SCN5AQ14524 2016 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 SFNP31947 248 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 ADAM17P78536 824 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 TRIM71Q2Q1W2 868 aaKnown RBP21.28■■□□□ 1
SUSD3-205ENST00000617293 TMEM240Q5SV17 173 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 ZNF618Q5T7W0 954 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 LRRC8DQ7L1W4 858 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 MIER3Q7Z3K6 550 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 RNPC3Q96LT9 517 aaKnown RBP21.28■■□□□ 1
SUSD3-205ENST00000617293 KCNMB3Q9NPA1 279 aa21.28■■□□□ 1
SUSD3-205ENST00000617293 MAFBQ9Y5Q3 323 aaPredicted RBP21.28■■□□□ 1
SUSD3-205ENST00000617293 RRN3P2A6NIE6 340 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 TBX3O15119 743 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 BAG4O95429 457 aaKnown RBP21.27■■□□□ 1
SUSD3-205ENST00000617293 FGBP02675 491 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 ATP4AP20648 1035 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 FXR1P51114 621 aaKnown RBP eCLIP21.27■■□□□ 1
SUSD3-205ENST00000617293 JAK3P52333 1124 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 RBL2Q08999 1139 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 LRIT3Q3SXY7 679 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 PSRC1Q6PGN9 363 aaPredicted RBP21.27■■□□□ 1
SUSD3-205ENST00000617293 HAS1Q92839 578 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 TUBE1Q9UJT0 475 aa21.27■■□□□ 1
SUSD3-205ENST00000617293 WNT7AO00755 349 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 HBP1O60381 514 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 RFC2P35250 354 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 MARCH8Q5T0T0 291 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 NOSTRINQ8IVI9 506 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 ATP8B4Q8TF62 1192 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 TRAPPC12Q8WVT3 735 aa21.26■□□□□ 0.99
SUSD3-205ENST00000617293 FTOQ9C0B1 505 aaKnown RBP eCLIP21.26■□□□□ 0.99
SUSD3-205ENST00000617293 WDR81Q562E7 1941 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 KIF28PB7ZC32 967 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 H3BQV1 296 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 SOX1O00570 391 aaPredicted RBP21.25■□□□□ 0.99
SUSD3-205ENST00000617293 PFKMP08237 780 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 MCTP1Q6DN14 999 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 B3GNT9Q6UX72 402 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 RUFY4Q6ZNE9 571 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 OTOP2Q7RTS6 562 aa21.25■□□□□ 0.99
SUSD3-205ENST00000617293 SLFN12Q8IYM2 578 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms