RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 SPIRE2Q8WWL2 714 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 WDR11Q9BZH6 1224 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 EFCAB8A8MWE9 144 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 CD58P19256 250 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 PARVGQ9HBI0 331 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 KCPQ6ZWJ8 1503 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 LAD1O00515 517 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 EPHB6O15197 1021 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 ASNSP08243 561 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 MTMR1Q13613 665 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 BAATQ14032 418 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 TRIP13Q15645 432 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 CCDC114Q96M63 670 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 ADAM33Q9BZ11 813 aa16.22■□□□□ 0.19
TNFRSF11A-206ENST00000617039 KDM3AQ9Y4C1 1321 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 IL1R1P14778 569 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 SMTNP53814 917 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 CKAP4Q07065 602 aaKnown RBP16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 SNX1Q13596 522 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 GBP6Q6ZN66 633 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 RUSC1Q9BVN2 902 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 NPY5RQ15761 445 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 SWSAP1Q6NVH7 229 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 FAN1Q9Y2M0 1017 aa16.21■□□□□ 0.19
TNFRSF11A-206ENST00000617039 PALMO75781 387 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CALCAP01258 141 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CASP5P51878 434 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GPR162Q16538 588 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SCARA5Q6ZMJ2 495 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 C10orf67Q8IYJ2 551 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ATG4CQ96DT6 458 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RPAP3Q9H6T3 665 aaPredicted RBP16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 STK17AQ9UEE5 414 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.18
TNFRSF11A-206ENST00000617039 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NR3C1P04150 777 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TMOD1P28289 359 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GIMAP8Q8ND71 665 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DYDC1Q8WWB3 177 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PANX2Q96RD6 677 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 APOL6Q9BWW8 343 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 NAA15Q9BXJ9 866 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 EPB41L5Q9HCM4 733 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 MSH4O15457 936 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 VAV2P52735 878 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 VSNL1P62760 191 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PADI6Q6TGC4 694 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PACSIN1Q9BY11 444 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TAF1P21675 1872 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 EML1O00423 815 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 KAZNQ674X7 775 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HDXQ7Z353 690 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
TNFRSF11A-206ENST00000617039 EGFRP00533 1210 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GSTA5Q7RTV2 222 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 SULF1Q8IWU6 871 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 FAM118BQ9BPY3 351 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 PLCB1Q9NQ66 1216 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HSF2BPO75031 334 aa16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 N4BP1O75113 896 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CCDC66A2RUB6 948 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ATMINO43313 823 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 AFPP02771 609 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 DACT2Q5SW24 774 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 TAAR1Q96RJ0 339 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 POP1Q99575 1024 aaKnown RBP16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 GABBR1Q9UBS5 961 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ERLIN2O94905 339 aa16.18■□□□□ 0.18
TNFRSF11A-206ENST00000617039 ZNF18P17022 549 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms