RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 SPAG7O75391 227 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TNNI2P48788 182 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 IKQ13123 557 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 UAP1Q16222 522 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SPATA21Q7Z572 469 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 FBXO25Q8TCJ0 367 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SEMA4AQ9H3S1 761 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ARHGEF28Q8N1W1 1705 aaKnown RBP15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LONP1P36776 959 aaKnown RBP15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PDXDC2PQ6P474 469 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SNX29Q8TEQ0 813 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LRRC4CQ9HCJ2 640 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ENTPD5O75356 428 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ADAMTS2O95450 1211 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 BRAFP15056 766 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 KCNJ1P48048 391 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 NBPF10Q6P3W6 841 aaKnown RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RDH13Q8NBN7 331 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ANKS1AQ92625 1134 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 DDX27Q96GQ7 796 aaKnown RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CTTNBP2NLQ9P2B4 639 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ASAP1Q9ULH1 1129 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SMNDC1O75940 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 GFPT2O94808 682 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CALML3P27482 149 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ARHGAP22Q7Z5H3 698 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SPATA20Q8TB22 786 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 P3H4Q92791 437 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 NPHP3-ACAD11A0A0J9YXS1 232 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 FLOT1O75955 427 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SERPING1P05155 500 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RASSF2P50749 326 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 BYSLQ13895 437 aaKnown RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PLS1Q14651 629 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 MEA1Q16626 185 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
TNFRSF11A-205ENST00000616710 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 F8VZ95 297 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PRPHP41219 470 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RAB27AP51159 221 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 HIPK4Q8NE63 616 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ZNF507Q8TCN5 953 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RGL1Q9NZL6 768 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SLC12A6Q9UHW9 1150 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CORO1CQ9ULV4 474 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TMEM266Q2M3C6 531 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PDXDC1Q6P996 788 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SPOPO43791 374 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 NCALDP61601 193 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 KCNMA1Q12791 1236 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 GJA10Q969M2 543 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SMC6Q96SB8 1091 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TTC1Q99614 292 aa15.17■□□□□ 0.02
TNFRSF11A-205ENST00000616710 THAP12O43422 761 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SETSIPP0DME0 302 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 RABL6Q3YEC7 729 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 KRT79Q5XKE5 535 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SH3RF1Q7Z6J0 888 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 CHCHD3Q9NX63 227 aaKnown RBP15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SRCAPQ6ZRS2 3230 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 GRID2IPA4D2P6 1211 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 IRS4O14654 1257 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LRRN2O75325 713 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SKIP12755 728 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 ATF3P18847 181 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 MTM1Q13496 603 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 SEPT2Q15019 361 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TMED2Q15363 201 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LRIG3Q6UXM1 1119 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 HS2ST1Q7LGA3 356 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 TMC3Q7Z5M5 1100 aa15.16■□□□□ 0.02
TNFRSF11A-205ENST00000616710 LRRC37BQ96QE4 947 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms