RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MAGEA1P43355 309 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 LDHDQ86WU2 507 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 BTBD18B2RXH4 712 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 NNMTP40261 264 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 GARSP41250 739 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 EPHA7Q15375 998 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 EHD4Q9H223 541 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 CCDC68Q9H2F9 335 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 THAP9Q9H5L6 903 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 SLC38A10Q9HBR0 1119 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 TAB2Q9NYJ8 693 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 ANAPC4Q9UJX5 808 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 TBXAS1P24557 533 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 ARL4AP40617 200 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 CACNB3P54284 484 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 RPS6KA1Q15418 735 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 DPF2Q92785 391 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 RRAGCQ9HB90 399 aa10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
TNFRSF9-204ENST00000615230 SNRPFP62306 86 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 UBE2SQ16763 222 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 PEX26Q7Z412 305 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 DEFB132Q7Z7B7 95 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 FAM83AQ86UY5 434 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 NLRP4Q96MN2 994 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 TYW1Q9NV66 732 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 V9GYY5 206 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 ITKQ08881 620 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 CMTR1Q8N1G2 835 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 JPH1Q9HDC5 661 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 PCDHA10Q9Y5I2 948 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 GPR75-ASB3A0A0A6YYF3 556 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARPP19P56211 112 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 PALM2Q8IXS6 379 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCHCR1Q8TD31 782 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SMC6Q96SB8 1091 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 MOCS3O95396 460 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPP4CP60510 307 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF667Q5HYK9 610 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SCYL2Q6P3W7 929 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 IFT20Q8IY31 132 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 CNPY4Q8N129 248 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 U2AF1L4Q8WU68 220 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 P2RX5Q93086 422 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZDHHC15Q96MV8 337 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 BCL9O00512 1426 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SRGNP10124 158 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 RALAP11233 206 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 MARK3P27448 753 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 RUFY4Q6ZNE9 571 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 NSUN7Q8NE18 718 aaKnown RBP10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
TNFRSF9-204ENST00000615230 SRGAP2CP0DJJ0 459 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF589Q86UQ0 364 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 NKIRAS1Q9NYS0 192 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 CLDN3O15551 220 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 MAP3K7O43318 606 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 NR2F2P24468 414 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 KRT17Q04695 432 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 IFRD2Q12894 506 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 PPFIA1Q13136 1202 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 CCDC186Q7Z3E2 898 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 ANKS4BQ8N8V4 417 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 KIAA1468Q9P260 1216 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 SCINQ9Y6U3 715 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 MEGF6O75095 1541 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 BRD1O95696 1058 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 RECQLP46063 649 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 KIF23Q02241 960 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 NFX1Q12986 1120 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 CFAP221Q4G0U5 840 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 HSP90AA4PQ58FG1 418 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 RRAGAQ7L523 313 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 ZNF579Q8NAF0 562 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 MYO1AQ9UBC5 1043 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 ABCC6O95255 1503 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 UBE4BO95155 1302 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 STK25O00506 426 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 ARHGAP6O43182 974 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 LRMPQ12912 555 aa10.57□□□□□ -0.72
TNFRSF9-204ENST00000615230 PNOCQ13519 176 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms