RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 MESDQ14696 234 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 HOOK3Q86VS8 718 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 THRAP3Q9Y2W1 955 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 CTTNQ14247 550 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 GRIK5Q16478 980 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 GPATCH4Q5T3I0 446 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 C4orf32Q8N8J7 132 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 HMGB1P1B2RPK0 211 aaPredicted RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 MIIPQ5JXC2 388 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 SLFN12Q8IYM2 578 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 PBKQ96KB5 322 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 METTL14Q9HCE5 456 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 ASIC3Q9UHC3 531 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 FBXL5Q9UKA1 691 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 MTUS1Q9ULD2 1270 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 DAAM1Q9Y4D1 1078 aa13.68□□□□□ -0.22
MSH6-213ENST00000614496 BZW2Q9Y6E2 419 aaKnown RBP13.68□□□□□ -0.22
MSH6-213ENST00000614496 TULP2O00295 520 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 SART1O43290 800 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 PDHBP11177 359 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 TMOD1P28289 359 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 GPSM2P81274 684 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 UBL4BQ8N7F7 174 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 MAGOHBQ96A72 148 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 NSRP1Q9H0G5 558 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 FLT1P17948 1338 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 ZNF263O14978 683 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 PPP1R37O75864 691 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 LSP1P33241 339 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 SP4Q02446 784 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 CASKIN2Q8WXE0 1202 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 ICA1Q05084 483 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 PTK2Q05397 1052 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 CDC37Q16543 378 aaPredicted RBP13.67□□□□□ -0.22
MSH6-213ENST00000614496 KLHDC7AQ5VTJ3 777 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 CEP63Q96MT8 703 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
MSH6-213ENST00000614496 MYO1FO00160 1098 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 RPS6KA4O75676 772 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 GJB7Q6PEY0 223 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 GLYCTKQ8IVS8 523 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 TEKT1Q969V4 418 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 ZBTB5O15062 677 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 GAS7O60861 476 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 KRT5P13647 590 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 ZNF384Q8TF68 577 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 TBC1D31Q96DN5 1066 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 BICD1Q96G01 975 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 PNMA5Q96PV4 448 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 FMO2Q99518 471 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 CELF4Q9BZC1 486 aaKnown RBP13.66□□□□□ -0.22
MSH6-213ENST00000614496 BLOC1S4Q9NUP1 217 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 FERP16591 822 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.228e-6■■■■■ 52.4
MSH6-213ENST00000614496 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
MSH6-213ENST00000614496 QRICH1Q2TAL8 776 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 MCTP2Q6DN12 878 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 AENQ8WTP8 325 aaKnown RBP13.66□□□□□ -0.22
MSH6-213ENST00000614496 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
MSH6-213ENST00000614496 TTI1O43156 1089 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 NR3C1P04150 777 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 CLTAP09496 248 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 COPB2P35606 906 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
MSH6-213ENST00000614496 PDIA5Q14554 519 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 NAB2Q15742 525 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 AMNQ9BXJ7 453 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
MSH6-213ENST00000614496 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms