RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CASP1P29466 404 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 MDH1P40925 334 aaKnown RBP24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 NT5C2P49902 561 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 HAUS3Q68CZ6 603 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 CATIPQ7Z7H3 387 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 ANKRD13AQ8IZ07 590 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 ACER1Q8TDN7 264 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 RNPC3Q96LT9 517 aaKnown RBP24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 KANSL2Q9H9L4 492 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 SLC40A1Q9NP59 571 aa24.12■■□□□ 1.45
POLR2J3-220ENST00000613744 A0A1W2PQJ5 194 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 NR1D1P20393 614 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 ZYXQ15942 572 aaKnown RBP24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 SNCBQ16143 134 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 TTC19Q6DKK2 380 aaPredicted RBP24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 PDXDC2PQ6P474 469 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 IRF2BP1Q8IU81 584 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 P3H4Q92791 437 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 CCT8L2Q96SF2 557 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 ZHX2Q9Y6X8 837 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 GREB1LQ9C091 1923 aaPredicted RBP24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 A0A1W2PRG0 241 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 RCCD1A6NED2 376 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 TTLL1O95922 423 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 PAFAH1B1P43034 410 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 PAK2Q13177 524 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 DGKHQ86XP1 1220 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 FMNL3Q8IVF7 1028 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 OXER1Q8TDS5 423 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 HDAC7Q8WUI4 952 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 N4BP2L2Q92802 583 aaPredicted RBP24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 TMEM47Q9BQJ4 181 aa24.11■■□□□ 1.45
POLR2J3-220ENST00000613744 DOCK1Q14185 1865 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 TRPM7Q96QT4 1865 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 KRT2P35908 639 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 SPA17Q15506 151 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 GDF3Q9NR23 364 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 TSKSQ9UJT2 592 aa24.1■■□□□ 1.45
POLR2J3-220ENST00000613744 DGKZQ13574 1117 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 CCDC178Q5BJE1 867 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 RNF187Q5TA31 235 aaPredicted RBP24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 ALS2CR12Q96Q35 445 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 OSBPL9Q96SU4 736 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 MAGEC2Q9UBF1 373 aaPredicted RBP24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 MYH6P13533 1939 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 USP17L5A8MUK1 530 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 RPN1P04843 607 aaKnown RBP24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 SLC8A1P32418 973 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 ATP2C1P98194 919 aaPredicted RBP24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 NOL9Q5SY16 702 aaKnown RBP24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 LDLRAD1Q5T700 205 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 C8orf74Q6P047 294 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 CCDC121Q6ZUS5 278 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 ADSSL1Q8N142 457 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 PNMA1Q8ND90 353 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 ATP6V1G3Q96LB4 118 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 SH2D4AQ9H788 454 aa24.09■■□□□ 1.45
POLR2J3-220ENST00000613744 PAPPA2Q9BXP8 1791 aa24.08■■□□□ 1.45
POLR2J3-220ENST00000613744 EZRP15311 586 aaKnown RBP24.08■■□□□ 1.45
POLR2J3-220ENST00000613744 HUNKP57058 714 aa24.08■■□□□ 1.45
POLR2J3-220ENST00000613744 CCDC181Q5TID7 509 aa24.08■■□□□ 1.45
POLR2J3-220ENST00000613744 OTUD5Q96G74 571 aa24.08■■□□□ 1.45
POLR2J3-220ENST00000613744 MKRN3Q13064 507 aaKnown RBP24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 SPP2Q13103 211 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 PARP9Q8IXQ6 854 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 CMTR1Q8N1G2 835 aaKnown RBP24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 CCDC82Q8N4S0 544 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 WHAMMQ8TF30 809 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 PHF20Q9BVI0 1012 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 EXOC1Q9NV70 894 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 VPS54Q9P1Q0 977 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 MYH4Q9Y623 1939 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 A0A1B0GUA9 196 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 HNRNPH3P31942 346 aaKnown RBP24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 ATP1A2P50993 1020 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 FSTL1Q12841 308 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 KCNB1Q14721 858 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 EIF1ADQ8N9N8 165 aaKnown RBP24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 FANCBQ8NB91 859 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 SLC10A4Q96EP9 437 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 SGSM3Q96HU1 749 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 ATP6V0A4Q9HBG4 840 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 NYAP2Q9P242 653 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 TFR2Q9UP52 801 aa24.07■■□□□ 1.44
POLR2J3-220ENST00000613744 MACROD2A1Z1Q3 448 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 LCA5LO95447 670 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 PRCPP42785 496 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 FKBP1BP68106 108 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 TROAPQ12815 778 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 SPICE1Q8N0Z3 855 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 ZNF233A6NK53 670 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 MYL1P05976 194 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 LRIG3Q6UXM1 1119 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 SH2D3CQ8N5H7 860 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 OPTNQ96CV9 577 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 CCDC114Q96M63 670 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 CCDC43Q96MW1 224 aaKnown RBP24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
POLR2J3-220ENST00000613744 ABT1Q9ULW3 272 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms