RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 NFKBIEO00221 500 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 PJA2O43164 708 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 MOCS3O95396 460 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 BMP3P12645 472 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 RPA1P27694 616 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 EDRF1Q3B7T1 1238 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 HGSNATQ68CP4 663 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
TUBD1-216ENST00000613721 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 CNTNAP1P78357 1384 aa13.18□□□□□ -0.3
TUBD1-216ENST00000613721 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ENTPD3O75355 529 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 NOL4O94818 638 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 EPS15P42566 896 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ECE1P42892 770 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 MMP14P50281 582 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ADAM9Q13443 819 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 FAM83BQ5T0W9 1011 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 FAM20AQ96MK3 541 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 PDE2AO00408 941 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 CETN3O15182 167 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SERPING1P05155 500 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SPATA31C1P0DKV0 1188 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 NR2F2P24468 414 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-216ENST00000613721 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
TUBD1-216ENST00000613721 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 MEIS1O00470 390 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 PRLRP16471 622 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 PSMC6P62333 389 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 PDE4CQ08493 712 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 GIT2Q14161 759 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
TUBD1-216ENST00000613721 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBD1-216ENST00000613721 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
TUBD1-216ENST00000613721 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
TUBD1-216ENST00000613721 MSH4O15457 936 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 TLR2O60603 784 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 CIITAP33076 1130 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 CASP5P51878 434 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 C2orf54Q08AI8 447 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 CREG2Q8IUH2 290 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 OPLAHO14841 1288 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 POLD1P28340 1107 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 ZNF76P36508 570 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 ITIH3Q06033 890 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 RAPGEF1Q13905 1077 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 NOX5Q96PH1 765 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-216ENST00000613721 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
TUBD1-216ENST00000613721 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
TUBD1-216ENST00000613721 KNOP1Q1ED39 458 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms