RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 VAV3Q9UKW4 847 aa14.93□□□□□ -0.02
MDC1-209ENST00000613547 TRPC6Q9Y210 931 aa14.93□□□□□ -0.02
MDC1-209ENST00000613547 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 DKC1O60832 514 aaKnown RBP eCLIP14.92□□□□□ -0.02
MDC1-209ENST00000613547 MARK3P27448 753 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 NCAPH2Q6IBW4 605 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 B3GNT9Q6UX72 402 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 SESTD1Q86VW0 696 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 C7orf61Q8IZ16 206 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 ZNF396Q96N95 335 aaPredicted RBP14.92□□□□□ -0.02
MDC1-209ENST00000613547 PCYT2Q99447 389 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 TMEM60Q9H2L4 133 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 GABBR1Q9UBS5 961 aa14.92□□□□□ -0.02
MDC1-209ENST00000613547 C17orf102A2RUQ5 167 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 F13A1P00488 732 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 CLTBP09497 229 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 SMIM10L2AP0DMW4 78 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 SMIM10L2BP0DMW5 78 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 PRPHP41219 470 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 EPHA7Q15375 998 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 DTHD1Q6ZMT9 781 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 FAM126BQ8IXS8 530 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 FAM167AQ96KS9 214 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 HDAC6Q9UBN7 1215 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 GTF2IRD1Q9UHL9 959 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 MAFBQ9Y5Q3 323 aaPredicted RBP14.91□□□□□ -0.02
MDC1-209ENST00000613547 BRCA2P51587 3418 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 NRCAMQ92823 1304 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 IGSF9BQ9UPX0 1349 aa14.91□□□□□ -0.02
MDC1-209ENST00000613547 POTEB3A0JP26 581 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 RRN3P2A6NIE6 340 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 P4HBP07237 508 aaKnown RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■□□□ 12.1
MDC1-209ENST00000613547 PSMC5P62195 406 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 PPFIA1Q13136 1202 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 FOXD4L5Q5VV16 416 aaPredicted RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 ARL6IP4Q66PJ3 421 aaKnown RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 POTEBQ6S5H4 581 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 C4orf32Q8N8J7 132 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 ERMNQ8TAM6 284 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 ATP8B4Q8TF62 1192 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 FOXD4L4Q8WXT5 416 aaPredicted RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 RNPEPQ9H4A4 650 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 PRDM5Q9NQX1 630 aaPredicted RBP14.9□□□□□ -0.02
MDC1-209ENST00000613547 TMEM39AQ9NV64 488 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 STK24Q9Y6E0 443 aa14.9□□□□□ -0.02
MDC1-209ENST00000613547 EML1O00423 815 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 HBP1O60381 514 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 B4GALT4O60513 344 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 TECP42680 631 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 QARSP47897 775 aaKnown RBP14.89□□□□□ -0.03
MDC1-209ENST00000613547 PLCB4Q15147 1175 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 PTGISQ16647 500 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 HAUS3Q68CZ6 603 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 CCDC155Q8N6L0 562 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 PPP1R13LQ8WUF5 828 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
MDC1-209ENST00000613547 NRBP2Q9NSY0 501 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 LRWD1Q9UFC0 647 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
MDC1-209ENST00000613547 POTEMA6NI47 508 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 CD4P01730 458 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 OATP04181 439 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 INSRRP14616 1297 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 NUCB2P80303 420 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 PRKCEQ02156 737 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 FAAP100Q0VG06 881 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 PDIA5Q14554 519 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 GRIK4Q16099 956 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 XKR3Q5GH77 459 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 ATL3Q6DD88 541 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
MDC1-209ENST00000613547 FAM173BQ6P4H8 233 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 BANK1Q8NDB2 785 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 EIF2AK1Q9BQI3 630 aaKnown RBP14.88□□□□□ -0.03
MDC1-209ENST00000613547 LXNQ9BS40 222 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 TRPV6Q9H1D0 765 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 ZSWIM4Q9H7M6 989 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 TRMT13Q9NUP7 481 aaKnown RBP14.88□□□□□ -0.03
MDC1-209ENST00000613547 SETD4Q9NVD3 440 aa14.88□□□□□ -0.03
MDC1-209ENST00000613547 COL1A2P08123 1366 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 BRD1O95696 1058 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 RAG1P15918 1043 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 IGBP1P78318 339 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 PTK7Q13308 1070 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 PKP1Q13835 747 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 UGCGQ16739 394 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 ZNF484Q5JVG2 852 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 TRMT1LQ7Z2T5 733 aaKnown RBP14.87□□□□□ -0.03
MDC1-209ENST00000613547 TPH2Q8IWU9 490 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 DYDC2Q96IM9 177 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 TUBE1Q9UJT0 475 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 SCN10AQ9Y5Y9 1956 aa14.87□□□□□ -0.03
MDC1-209ENST00000613547 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms