RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 LETM2Q2VYF4 491 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 RASIP1Q5U651 963 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 KRT40Q6A162 431 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
CSTF1-208ENST00000613138 RETREG2Q8NC44 543 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 ZNF215Q9UL58 517 aaPredicted RBP14.37□□□□□ -0.11
CSTF1-208ENST00000613138 CHD9Q3L8U1 2897 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
CSTF1-208ENST00000613138 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 BTBD18B2RXH4 712 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 INSRRP14616 1297 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 MYOGP15173 224 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 SELPP16109 830 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 RABGGTBP53611 331 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 BFSP2Q13515 415 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 UGCGQ16739 394 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 SWSAP1Q6NVH7 229 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSTF1-208ENST00000613138 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 SMARCAD1Q9H4L7 1026 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 COL6A3P12111 3177 aa14.36□□□□□ -0.11
CSTF1-208ENST00000613138 CHD7Q9P2D1 2997 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 IGKV6D-21A0A0A0MT36 114 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 BACH1O14867 736 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 KRT2P35908 639 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 STAT5BP51692 787 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 USP11P51784 963 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 SETQ01105 290 aaPredicted RBP14.35□□□□□ -0.11
CSTF1-208ENST00000613138 RBL2Q08999 1139 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 RABEP1Q15276 862 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 MCTP2Q6DN12 878 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
CSTF1-208ENST00000613138 DEFB123Q8N688 67 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 AFAP1L1Q8TED9 768 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 MBOAT7Q96N66 472 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
CSTF1-208ENST00000613138 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
CSTF1-208ENST00000613138 CYP3A7-CYP3A51PA0A087WV96 503 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 TMEM150BA6NC51 233 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 MMP1P03956 469 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 CYP3A7P24462 503 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 Q4G0T1 1027 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 DIS3L2Q8IYB7 885 aaKnown RBP14.34□□□□□ -0.11
CSTF1-208ENST00000613138 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 BACH2Q9BYV9 841 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 FAM49AQ9H0Q0 323 aaPredicted RBP14.34□□□□□ -0.11
CSTF1-208ENST00000613138 AZI2Q9H6S1 392 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 ZNF302Q9NR11 478 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 GABBR1Q9UBS5 961 aa14.34□□□□□ -0.11
CSTF1-208ENST00000613138 DDX25Q9UHL0 483 aaKnown RBP14.34□□□□□ -0.11
CSTF1-208ENST00000613138 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
CSTF1-208ENST00000613138 EYSQ5T1H1 3165 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 ZBTB42B2RXF5 422 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 EML1O00423 815 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 ZNF862O60290 1169 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 CCNT1O60563 726 aaKnown RBP14.33□□□□□ -0.12
CSTF1-208ENST00000613138 GAS7O60861 476 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 PSMD10O75832 226 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 CHRNA1P02708 482 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 XBP1P17861 261 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 DEFB103AP81534 67 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 ZNF746Q6NUN9 644 aaPredicted RBP14.33□□□□□ -0.12
CSTF1-208ENST00000613138 GPR153Q6NV75 609 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 NEK8Q86SG6 692 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
CSTF1-208ENST00000613138 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 WASF1Q92558 559 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 HAS1Q92839 578 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 TMX3Q96JJ7 454 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 ZSCAN31Q96LW9 406 aaPredicted RBP14.33□□□□□ -0.12
CSTF1-208ENST00000613138 PPP1R16BQ96T49 567 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 SH2D3AQ9BRG2 576 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 PBX4Q9BYU1 374 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 SAMM50Q9Y512 469 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
CSTF1-208ENST00000613138 MBLAC1A4D2B0 266 aaPredicted RBP14.32□□□□□ -0.12
CSTF1-208ENST00000613138 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 CXCL10P02778 98 aa14.32□□□□□ -0.12
CSTF1-208ENST00000613138 RSPH10BP0C881 870 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms