RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZBTB18Q99592 522 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.99e-6■■■□□ 18.5
TTC28-208ENST00000612946 hCG_2014768A0A024R1R8 64 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RASA4BC9J798 803 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RASA4O43374 803 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RPS6KA5O75582 802 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RBL2Q08999 1139 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 GHRP10912 638 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 PGM1P36871 562 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RUNX1T1Q06455 604 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 LAMC2Q13753 1193 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 APPBP2Q92624 585 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 IL17RAQ96F46 866 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 GCOM2Q9BZD3 368 aaPredicted RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 GOLPH3LQ9H4A5 285 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 PRR23D1E9PI22 279 aaPredicted RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 WDR47O94967 919 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 KLHL2O95198 593 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 PRR23D2P0DMB1 279 aaPredicted RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 RBM5P52756 815 aaKnown RBP eCLIP9.4□□□□□ -0.9
TTC28-208ENST00000612946 SCRN1Q12765 414 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 ALCAMQ13740 583 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 PRPSAP1Q14558 356 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 ZNF174Q15697 407 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 WDR93Q6P2C0 686 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 RGS9BPQ6ZS82 235 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 NDEL1Q9GZM8 345 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 OLFML3Q9NRN5 406 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 STOML2Q9UJZ1 356 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 TLK1Q9UKI8 766 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 SAC3D1A6NKF1 404 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 PSMA4P25789 261 aaKnown RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 Q4G0T1 1027 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 CYB5RLQ6IPT4 315 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 ROPN1BQ9BZX4 212 aaPredicted RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 ROPN1Q9HAT0 212 aaPredicted RBP9.4□□□□□ -0.9
TTC28-208ENST00000612946 NAA35Q5VZE5 725 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 HDAC11Q96DB2 347 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 TCEANC2Q96MN5 208 aa9.4□□□□□ -0.9
TTC28-208ENST00000612946 M0R3G1 203 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 DAPK3O43293 454 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 POLR2EP19388 210 aaKnown RBP9.4□□□□□ -0.91
TTC28-208ENST00000612946 HERC4Q5GLZ8 1057 aaPredicted RBP9.4□□□□□ -0.91
TTC28-208ENST00000612946 ATAD3BQ5T9A4 648 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 PRPF18Q99633 342 aaKnown RBP9.4□□□□□ -0.91
TTC28-208ENST00000612946 CCT7Q99832 543 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 EDEM3Q9BZQ6 932 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 GAP43P17677 238 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 HMOX2P30519 316 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 TTKP33981 857 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.91
TTC28-208ENST00000612946 GTPBP10A4D1E9 387 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 EXOC3O60645 756 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 KLC2Q9H0B6 622 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 CORO1CQ9ULV4 474 aaPredicted RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 A8MXQ7 604 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 STAT4Q14765 748 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 EXOC3L4Q17RC7 722 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ASPSCR1Q9BZE9 553 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 A0A0G2JND7 137 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 CAPN1P07384 714 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ARFIP2P53365 341 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ORC2Q13416 577 aaPredicted RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 TRADDQ15628 312 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TRMT5Q32P41 509 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 LRWD1Q9UFC0 647 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 RABGEF1Q9UJ41 708 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 F8W8V4 182 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 H7C0S8 307 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 MYO1FO00160 1098 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TBC1D4O60343 1298 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 S100A9P06702 114 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 ADCY7P51828 1080 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 IQCB1Q15051 598 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 RPL26L1Q9UNX3 145 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 ESYT2A0FGR8 921 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 FAM161BQ96MY7 647 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 RNF103-CHMP3A0A140T963 221 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 HSPA2P54652 639 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 PPP2R5CQ13362 524 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 C11orf57Q6ZUT1 292 aaPredicted RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 UBN1Q9NPG3 1134 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 COPEO14579 308 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms