RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HOXA10P31260 410 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 IFT88Q13099 833 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 IFT81Q8WYA0 676 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 ZDHHC15Q96MV8 337 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
FAM3A-221ENST00000612856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
FAM3A-221ENST00000612856 SKAP2O75563 359 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 ARPP19P56211 112 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PEX3P56589 373 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 CNNM4Q6P4Q7 775 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 OPTNQ96CV9 577 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 CCDC42Q96M95 316 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 MED4Q9NPJ6 270 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 ENTPD3O75355 529 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 GGCXP38435 758 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 CAP2P40123 477 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PDCLQ13371 301 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 NEDD9Q14511 834 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 CCDC121Q6ZUS5 278 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 ZNF512BQ96KM6 892 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 MMP19Q99542 508 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PPANQ9NQ55 473 aaKnown RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 BAIAP2L1Q9UHR4 511 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 SRGAP2O75044 1071 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PRPF6O94906 941 aaKnown RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 PHLDB2Q86SQ0 1253 aa11.85□□□□□ -0.51
FAM3A-221ENST00000612856 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
FAM3A-221ENST00000612856 HSF2BPO75031 334 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 TXNP10599 105 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 ALX1Q15699 326 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 STXBP2Q15833 593 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 C16orf86Q6ZW13 317 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 TEX13BQ9BXU2 312 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 KCNG1Q9UIX4 513 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 IPO5O00410 1097 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 CAPN15O75808 1086 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 NSUN6Q8TEA1 469 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 FOXP1Q9H334 677 aaPredicted RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 LUC7L2Q9Y383 392 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 RPS6P62753 249 aaKnown RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 BEND6Q5SZJ8 279 aaPredicted RBP11.84□□□□□ -0.51
FAM3A-221ENST00000612856 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 DONSONQ9NYP3 566 aa11.84□□□□□ -0.51
FAM3A-221ENST00000612856 HGSO14964 777 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 STX10O60499 249 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 CCDC122Q5T0U0 273 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NAIF1Q69YI7 327 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 FMR1NBQ8N0W7 255 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 PPM1KQ8N3J5 372 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 SYNJ2BP-COX16A0A087WUM0 186 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 ZBBXA8MT70 800 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 ORC4O43929 436 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 CSDE1O75534 798 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 MCM3P25205 808 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 TFAMQ00059 246 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 USP37Q86T82 979 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 CDCA5Q96FF9 252 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 JMJD4Q9H9V9 463 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 SAMSN1Q9NSI8 373 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 COX16Q9P0S2 106 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 FEM1BQ9UK73 627 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 MYO6Q9UM54 1294 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 BICDL2A1A5D9 508 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NFIBO00712 420 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 IRF6O14896 467 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 TMOD1P28289 359 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 CCND2P30279 289 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 GRM4Q14833 912 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 B4GALNT4Q76KP1 1039 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 TAX1BP1Q86VP1 789 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 DYDC2Q96IM9 177 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms