RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TCF15Q12870 199 aa19.85■□□□□ 0.77
CSNK1E-215ENST00000612795 COASYQ13057 564 aa19.85■□□□□ 0.77
CSNK1E-215ENST00000612795 KLHL23Q8NBE8 558 aa19.85■□□□□ 0.77
CSNK1E-215ENST00000612795 DNAJB3Q8WWF6 145 aa19.85■□□□□ 0.77
CSNK1E-215ENST00000612795 USP15Q9Y4E8 981 aaPredicted RBP19.85■□□□□ 0.77
CSNK1E-215ENST00000612795 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 MARK3P27448 753 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 GRM4Q14833 912 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 SEC23AQ15436 765 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 GRIK4Q16099 956 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 RBM23Q86U06 439 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 NPAS4Q8IUM7 802 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 GIMAP8Q8ND71 665 aaPredicted RBP19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 SPPL3Q8TCT6 385 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 POF1BQ8WVV4 589 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 LINC01599Q8WXQ3 324 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 SENP7Q9BQF6 1050 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 RIOX1Q9H6W3 641 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 FAM86C1Q9NVL1 165 aa19.84■□□□□ 0.77
CSNK1E-215ENST00000612795 GFRA3O60609 400 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 CD52P31358 61 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 MRPS6P82932 125 aaKnown RBP19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 SIGLEC14Q08ET2 396 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 SLC35G1Q2M3R5 365 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 PCNX4Q63HM2 1172 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 NLRX1Q86UT6 975 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 CUL5Q93034 780 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 RPGRIP1Q96KN7 1286 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 PHF7Q9BWX1 381 aaPredicted RBP19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 FTHL17Q9BXU8 183 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 ERAP1Q9NZ08 941 aa19.83■□□□□ 0.77
CSNK1E-215ENST00000612795 PLXNA3P51805 1871 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 M0QZ92 97 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 HIP1O00291 1037 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 GLP2RO95838 553 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 RPLP2P05387 115 aaKnown RBP19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 STAG3L1P0CL83 205 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 IGBP1P78318 339 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 CBX2Q14781 532 aaPredicted RBP19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 CYB5R4Q7L1T6 521 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 PIBF1Q8WXW3 757 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 GLG1Q92896 1179 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 FAM49AQ9H0Q0 323 aaPredicted RBP19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 TLE6Q9H808 572 aa19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 AGO3Q9H9G7 860 aaKnown RBP19.82■□□□□ 0.76
CSNK1E-215ENST00000612795 ERICH2A1L162 156 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 CYTH3O43739 400 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 IBSPP21815 317 aaPredicted RBP19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 TRDNQ13061 729 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 MICAL1Q8TDZ2 1067 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 IRF2BPLQ9H1B7 796 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 LRFN2Q9ULH4 789 aa19.81■□□□□ 0.76
CSNK1E-215ENST00000612795 MBLAC1A4D2B0 266 aaPredicted RBP19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 PPFIA3O75145 1194 aa19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 SCG2P13521 617 aa19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 VCPP55072 806 aaKnown RBP19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 IER5Q5VY09 327 aa19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 XRRA1Q6P2D8 792 aa19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 ATOH1Q92858 354 aaPredicted RBP19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 PCDHGC5Q9Y5F6 944 aa19.8■□□□□ 0.76
CSNK1E-215ENST00000612795 CACNA1HO95180 2353 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 FSD2A1L4K1 749 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 IFIT3O14879 490 aaKnown RBP19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 PAK2Q13177 524 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 SPOUT1Q5T280 376 aaKnown RBP19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 ZBTB33Q86T24 672 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 SEPT1Q8WYJ6 367 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 GPRASP2Q96D09 838 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 CDHR1Q96JP9 859 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 SMARCAD1Q9H4L7 1026 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 TRPV2Q9Y5S1 764 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 SQORQ9Y6N5 450 aa19.79■□□□□ 0.76
CSNK1E-215ENST00000612795 ATF7P17544 494 aaPredicted RBP19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 GATMP50440 423 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 TMEM62Q0P6H9 643 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 MARCH8Q5T0T0 291 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 USP17L6PQ6QN14 398 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 RTN4RL1Q86UN2 441 aaPredicted RBP19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 ASIC4Q96FT7 647 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 NEK1Q96PY6 1258 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 PKD2L1Q9P0L9 805 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 PADI3Q9ULW8 664 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 PCDHB12Q9Y5F1 795 aa19.78■□□□□ 0.76
CSNK1E-215ENST00000612795 CFAP54Q96N23 3096 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 GSTTP1A0A1W2PQM5 241 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 RRN3P2A6NIE6 340 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 PER2O15055 1255 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 SRGAP2BP0DMP2 458 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 KCNA2P16389 499 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 AVPR2P30518 371 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 UBE3AQ05086 875 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 WTAPQ15007 396 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 PTPN21Q16825 1174 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 ZBTB10Q96DT7 871 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 TLR9Q9NR96 1032 aa19.77■□□□□ 0.76
CSNK1E-215ENST00000612795 AAASQ9NRG9 546 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms