RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DDX39AO00148 427 aaKnown RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 USP14P54578 494 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 KCNH2Q12809 1159 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 MS4A14Q96JA4 679 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 WRAP73Q9P2S5 460 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA3-202ENST00000612467 COL4A5P29400 1685 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 RPA1P27694 616 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 NMT1P30419 496 aaKnown RBP15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 CDK17Q00537 523 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 SLC7A5Q01650 507 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 COG2Q14746 738 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 CASP8Q14790 479 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 SH2D3AQ9BRG2 576 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 AKAP3O75969 853 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 GCNT3O95395 438 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 STAT2P52630 851 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 Q4G0T1 1027 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 HAUS3Q68CZ6 603 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 CREG2Q8IUH2 290 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 SYT2Q8N9I0 419 aaPredicted RBP15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 DYDC2Q96IM9 177 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 ADAMTS1Q9UHI8 967 aa15.52■□□□□ 0.08
PCDHGA3-202ENST00000612467 A0A087X0T9 212 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 FRMD3A2A2Y4 597 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 FAM228BP0C875 321 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 SPDYE6P0CI01 402 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 MRIQ9BWK5 157 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 HDAC9Q9UKV0 1011 aa15.52■□□□□ 0.07
PCDHGA3-202ENST00000612467 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 FTCDO95954 541 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 TNNT3P45378 269 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 TUBB2AQ13885 445 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 PLS1Q14651 629 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 SFMBT2Q5VUG0 894 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 TUBB2BQ9BVA1 445 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 ZNF70Q9UC06 446 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 SNX12Q9UMY4 172 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 PCDHB13Q9Y5F0 798 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 ATRNL1Q5VV63 1379 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 ARP10275 920 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 EPS15P42566 896 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 TBC1D10BQ4KMP7 808 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 CNKSR1Q969H4 720 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 VPS18Q9P253 973 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 ZBTB21Q9ULJ3 1066 aa15.51■□□□□ 0.07
PCDHGA3-202ENST00000612467 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ASTN1O14525 1302 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ENTPD3O75355 529 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 TACC1O75410 805 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 KLRC1P26715 233 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ZNF662Q6ZS27 426 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 HDXQ7Z353 690 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 EHBP1Q8NDI1 1231 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 HNRNPLLQ8WVV9 542 aaKnown RBP15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 CEP72Q9P209 647 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 DMGDHQ9UI17 866 aaKnown RBP15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 RABGAP1Q9Y3P9 1069 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ABCB11O95342 1321 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 CETN3O15182 167 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ATP8B1O43520 1251 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 KNOP1Q1ED39 458 aaKnown RBP15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ERMNQ8TAM6 284 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 CCDC102AQ96A19 550 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 OSBPL9Q96SU4 736 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 LRRC1Q9BTT6 524 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 GLT8D2Q9H1C3 349 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 GANQ9H2C0 597 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
PCDHGA3-202ENST00000612467 SLITRK3O94933 977 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 LCA5LO95447 670 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 LRCH2Q5VUJ6 765 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 AGBL1Q96MI9 1066 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 NAP1L4Q99733 375 aaKnown RBP15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 TLR10Q9BXR5 811 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 ERLIN1O75477 346 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 MMP14P50281 582 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 DLGAP5Q15398 846 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 SLC9C1Q4G0N8 1177 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 OTOP1Q7RTM1 612 aa15.49■□□□□ 0.07
PCDHGA3-202ENST00000612467 TRIM58Q8NG06 486 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms