RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	SLC26A2	P50443	739 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	PLCB4	Q15147	1175 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	INF2	Q27J81	1249 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	MARCH8	Q5T0T0	291 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	DEFB128	Q7Z7B8	93 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	RPAIN	Q86UA6	219 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	SLC5A5	Q92911	643 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	TNFRSF25	Q93038	417 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	RIT2	Q99578	217 aa		18.94	■□□□□ 0.62
CCND3-222	ENST00000612455	MYH9	P35579	1960 aa	Known RBP	18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	RRN3P2	A6NIE6	340 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	DDX39A	O00148	427 aa	Known RBP	18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	NBN	O60934	754 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	CAND2	O75155	1236 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	KRT76	Q01546	638 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	OTOP2	Q7RTS6	562 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	CCDC83	Q8IWF9	413 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	TNPO1	Q92973	898 aa	Known RBP	18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	TBC1D32	Q96NH3	1257 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	UIMC1	Q96RL1	719 aa		18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	MTIF3	Q9H2K0	278 aa	Known RBP	18.93	■□□□□ 0.62
CCND3-222	ENST00000612455	CCDC194	A0A1B0GVG4	234 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	PSMD10	O75832	226 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	TDP2	O95551	362 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	INSRR	P14616	1297 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	ATP4A	P20648	1035 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	MARK3	P27448	753 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	PPFIA1	Q13136	1202 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	MBTPS1	Q14703	1052 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	GRIK4	Q16099	956 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	EARS2	Q5JPH6	523 aa	Known RBP	18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	FAM26D	Q5JW98	314 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	PPP4R3A	Q6IN85	833 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	MIS18BP1	Q6P0N0	1132 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	B3GNT9	Q6UX72	402 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	UPF2	Q9HAU5	1272 aa	Known RBP	18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	PCDHA10	Q9Y5I2	948 aa		18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.92	■□□□□ 0.62
CCND3-222	ENST00000612455	RSPH10B2	B2RC85	870 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	MMP1	P03956	469 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	RSPH10B	P0C881	870 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	KRT2	P35908	639 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	THPO	P40225	353 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	FAM160B1	Q5W0V3	765 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	KRT40	Q6A162	431 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	SWSAP1	Q6NVH7	229 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	NEK8	Q86SG6	692 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	ETNPPL	Q8TBG4	499 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	ZNF302	Q9NR11	478 aa		18.91	■□□□□ 0.62
CCND3-222	ENST00000612455	POTEB3	A0JP26	581 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	HBP1	O60381	514 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	ACTN1	P12814	892 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	GCFC2	P16383	781 aa	Known RBP	18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	NR5A1	Q13285	461 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	TAF2	Q6P1X5	1199 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	POTEB	Q6S5H4	581 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	RUFY4	Q6ZNE9	571 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	PIK3AP1	Q6ZUJ8	805 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	DEFB123	Q8N688	67 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	MTMR10	Q9NXD2	777 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	SLC4A7	Q9Y6M7	1214 aa		18.9	■□□□□ 0.62
CCND3-222	ENST00000612455	GRXCR1	A8MXD5	290 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	BTBD18	B2RXH4	712 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	BACH1	O14867	736 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	GAS7	O60861	476 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	PSAP	P07602	524 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	LETM2	Q2VYF4	491 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	LRCH2	Q5VUJ6	765 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	CNKSR3	Q6P9H4	555 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455		Q7L0L9	218 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	ATP8B4	Q8TF62	1192 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	GJA10	Q969M2	543 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	NAP1L4	Q99733	375 aa	Known RBP	18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	TEKT3	Q9BXF9	490 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	BACH2	Q9BYV9	841 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	BRMS1	Q9HCU9	246 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	KCNMB3	Q9NPA1	279 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	DISC1	Q9NRI5	854 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	DDX25	Q9UHL0	483 aa	Known RBP	18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	TUBE1	Q9UJT0	475 aa		18.89	■□□□□ 0.61
CCND3-222	ENST00000612455	TMEM265	A0A087WTH1	108 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	FAM205C	A6NFA0	338 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	WDR64	B1ANS9	1081 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	SLC37A4	O43826	429 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	ST18	O60284	1047 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	BAIAP3	O94812	1187 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	SFN	P31947	248 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	HMGN5	P82970	282 aa	Known RBP	18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	TCTN1	Q2MV58	587 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	PDXDC2P	Q6P474	469 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	DIS3L2	Q8IYB7	885 aa	Known RBP	18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	RDM1	Q8NG50	284 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	PHOSPHO2	Q8TCD6	241 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	FAM20A	Q96MK3	541 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	PBX4	Q9BYU1	374 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	SEMA6B	Q9H3T3	888 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	UNC45A	Q9H3U1	944 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms