RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 TBC1D7Q9P0N9 293 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 PCDHA5Q9Y5H7 936 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 SRGAP2O75044 1071 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 CYP2J2P51589 502 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 RNF207Q6ZRF8 634 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 NSUN6Q8TEA1 469 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 POMGNT1Q8WZA1 660 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 AMFRQ9UKV5 643 aa7.29□□□□□ -1.24
PBX1-221ENST00000612123 UTP11Q9Y3A2 253 aaKnown RBP7.29□□□□□ -1.24
PBX1-221ENST00000612123 GOLGA6CA6NDK9 693 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 GOLGA6BA6NDN3 693 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 GOLGA6DP0CG33 693 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SFNP31947 248 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 GBP1P32455 592 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 MFAP3P55082 362 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 EZH2Q15910 746 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 PRR5LQ6MZQ0 368 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 LPAR1Q92633 364 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 CEP170P1Q96L14 293 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 CCDC114Q96M63 670 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 TMEM47Q9BQJ4 181 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 KIAA1586Q9HCI6 787 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 GOLGA6AQ9NYA3 693 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 NALCNQ8IZF0 1738 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 LRRIQ3A6PVS8 624 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 LDHAP00338 332 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 TCP1P17987 556 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 LRRC63Q05C16 580 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 PDCLQ13371 301 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 NEDD9Q14511 834 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 STXBP2Q15833 593 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 ELMSAN1Q6PJG2 1045 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 ABI1Q8IZP0 508 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SNRNP27Q8WVK2 155 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 PARVGQ9HBI0 331 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SMARCAL1Q9NZC9 954 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 USH1CQ9Y6N9 552 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SLC26A4O43511 780 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 PDE6CP51160 858 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 CORO7P57737 925 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 RUFY4Q6ZNE9 571 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 ANKS4BQ8N8V4 417 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 BCAS4Q8TDM0 211 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SH3RF3Q8TEJ3 882 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 STAMQ92783 540 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 RAB17Q9H0T7 212 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 FAM207AQ9NSI2 230 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 SHPRHQ149N8 1683 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 CHGBP05060 677 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 GRM4Q14833 912 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 MAN2A1Q16706 1144 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 ZNF658Q5TYW1 1059 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 SND1Q7KZF4 910 aaKnown RBP eCLIP7.28□□□□□ -1.24
PBX1-221ENST00000612123 HDXQ7Z353 690 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 KCTD17Q8N5Z5 321 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 TBC1D16Q8TBP0 767 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 P2RX5Q93086 422 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 DYNLL2Q96FJ2 89 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 XPO4Q9C0E2 1151 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 TDRD3Q9H7E2 651 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 MED4Q9NPJ6 270 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 KMT5AQ9NQR1 393 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 C19orf81C9J6K1 198 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 RNF8O76064 485 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 LMNB1P20700 586 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 PTPREP23469 700 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 CCNE1P24864 410 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 MRPS9P82933 396 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 CYP4A11Q02928 519 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 TMEM110Q86TL2 294 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 MAP7D3Q8IWC1 876 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 ENOX1Q8TC92 643 aaKnown RBP7.28□□□□□ -1.24
PBX1-221ENST00000612123 RUNDC3BQ96NL0 473 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 MRGBPQ9NV56 204 aa7.28□□□□□ -1.24
PBX1-221ENST00000612123 ZNF233A6NK53 670 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 SFI1A8K8P3 1242 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 THAP12O43422 761 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 NDUFA8P51970 172 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 CCZ1BP86790 482 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 CCZ1P86791 482 aaPredicted RBP7.27□□□□□ -1.24
PBX1-221ENST00000612123 MTMR3Q13615 1198 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 TKFCQ3LXA3 575 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 SPOUT1Q5T280 376 aaKnown RBP7.27□□□□□ -1.24
PBX1-221ENST00000612123 PDXDC2PQ6P474 469 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.27□□□□□ -1.24
PBX1-221ENST00000612123 ANKRD36BP1Q96IX9 119 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 LSM14BQ9BX40 385 aaKnown RBP7.27□□□□□ -1.24
PBX1-221ENST00000612123 FUT8Q9BYC5 575 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 NKIRAS1Q9NYS0 192 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 BAIAP2L1Q9UHR4 511 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 NUB1Q9Y5A7 615 aa7.27□□□□□ -1.24
PBX1-221ENST00000612123 PDHA1P08559 390 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 GPSM2P81274 684 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 LACTBP83111 547 aaPredicted RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 PAK2Q13177 524 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms