RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
CBWD3-208ENST00000612050 TREHO43280 583 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 LGR5O75473 907 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 SEC24BO95487 1268 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 ATP2A2P16615 1042 aaKnown RBP13.96□□□□□ -0.18
CBWD3-208ENST00000612050 DNAJB2P25686 324 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 KRT2P35908 639 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 IGBP1P78318 339 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 ZNF200P98182 395 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-208ENST00000612050 IKBKEQ14164 716 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.18
CBWD3-208ENST00000612050 ME3Q16798 604 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 C8orf34Q49A92 452 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 NECAB1Q8N987 351 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-208ENST00000612050 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.18
CBWD3-208ENST00000612050 IGLV3-22A0A075B6J6 115 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 ABHD14A-ACY1A0A1B0GW23 586 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 HBP1O60381 514 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 GCFC2P16383 781 aaKnown RBP13.95□□□□□ -0.18
CBWD3-208ENST00000612050 SFNP31947 248 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-208ENST00000612050 ZNF618Q5T7W0 954 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 LRCH2Q5VUJ6 765 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 FAM184AQ8NB25 1140 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
CBWD3-208ENST00000612050 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 RIT2Q99578 217 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 PCDHA10Q9Y5I2 948 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
CBWD3-208ENST00000612050 ATG7O95352 703 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 HOXC8P31273 242 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 JAK3P52333 1124 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 HMGN5P82970 282 aaKnown RBP13.94□□□□□ -0.18
CBWD3-208ENST00000612050 RABEP1Q15276 862 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 IER5Q5VY09 327 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 Q7L0L9 218 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 NEK8Q86SG6 692 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 SEPT8Q92599 483 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 AIFM3Q96NN9 605 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 MTMR10Q9NXD2 777 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
CBWD3-208ENST00000612050 COL1A2P08123 1366 aa13.94□□□□□ -0.18
CBWD3-208ENST00000612050 MYH9P35579 1960 aaKnown RBP13.93□□□□□ -0.18
CBWD3-208ENST00000612050 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
CBWD3-208ENST00000612050 CTSHP09668 335 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 INSRRP14616 1297 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 GNL2Q13823 731 aaKnown RBP13.93□□□□□ -0.18
CBWD3-208ENST00000612050 INF2Q27J81 1249 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 Q4G0T1 1027 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 ZNF484Q5JVG2 852 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 SWSAP1Q6NVH7 229 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 ABHD15Q6UXT9 468 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 APBB2Q92870 758 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 CTAGE1Q96RT6 745 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 LLPHQ9BRT6 129 aaKnown RBP13.93□□□□□ -0.18
CBWD3-208ENST00000612050 PBX4Q9BYU1 374 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 CXXC1Q9P0U4 656 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-208ENST00000612050 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 PCDHA11Q9Y5I1 949 aa13.93□□□□□ -0.18
CBWD3-208ENST00000612050 CCNT1O60563 726 aaKnown RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 CXCL10P02778 98 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 AMHP03971 560 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 RBM25P49756 843 aaKnown RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 PLCB4Q15147 1175 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 TRIM71Q2Q1W2 868 aaKnown RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 ODR4Q5SWX8 454 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 PIK3AP1Q6ZUJ8 805 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 MIER3Q7Z3K6 550 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 NME8Q8N427 588 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 GAS2L1Q99501 681 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-208ENST00000612050 SEMA6BQ9H3T3 888 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 DISC1Q9NRI5 854 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 NRBP2Q9NSY0 501 aa13.92□□□□□ -0.18
CBWD3-208ENST00000612050 CYP3A7-CYP3A51PA0A087WV96 503 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 MSH4O15457 936 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 CHMP2AO43633 222 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 NBNO60934 754 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms