RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 EYA4O95677 639 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 PLEKP08567 350 aaPredicted RBP6.96□□□□□ -1.29
SNX13-213ENST00000611725 HPDP32754 393 aaPredicted RBP6.96□□□□□ -1.29
SNX13-213ENST00000611725 KLK7P49862 253 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 MXI1P50539 228 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 APBA1Q02410 837 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 SLC18A3Q16572 532 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 MOXD1Q6UVY6 613 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 MICALCLQ6ZW33 695 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 MSL3Q8N5Y2 521 aaKnown RBP6.96□□□□□ -1.29
SNX13-213ENST00000611725 OSBPL9Q96SU4 736 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 MMTAG2Q9BU76 263 aaKnown RBP6.96□□□□□ -1.29
SNX13-213ENST00000611725 PRR12Q9ULL5 1215 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 DLG5Q8TDM6 1919 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 FAM170AA1A519 330 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 POLRMTO00411 1230 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 GFPT2O94808 682 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 PPP2R5EQ16537 467 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 SLC35G1Q2M3R5 365 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 KRT71Q3SY84 523 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 CAPN6Q9Y6Q1 641 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 DUSP10Q9Y6W6 482 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 EIF2AK2P19525 551 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 C10orf67Q8IYJ2 551 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 FNBP1Q96RU3 617 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 REEP2Q9BRK0 252 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 RABEP2Q9H5N1 569 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 ZNF446Q9NWS9 450 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 N4BP1O75113 896 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 LRRN2O75325 713 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 UCHL3P15374 230 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 CHRNA5P30532 468 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 MEA1Q16626 185 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 CEP85LQ5SZL2 805 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 DYDC1Q8WWB3 177 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 SERPINA10Q9UK55 444 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 HSPA1LP34931 641 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 HNRNPH2P55795 449 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 MUM1L1Q5H9M0 696 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 PAPD7Q5XG87 772 aaKnown RBP6.96□□□□□ -1.3
SNX13-213ENST00000611725 TRIM59Q8IWR1 403 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 UBL4BQ8N7F7 174 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 BCAS4Q8TDM0 211 aa6.96□□□□□ -1.3
SNX13-213ENST00000611725 TMEM110-MUSTN1A8MSY1 372 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 IPO5O00410 1097 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 PALMO75781 387 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 SLC9A1P19634 815 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 KLRC1P26715 233 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 AOC3Q16853 763 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 SEL1L2Q5TEA6 688 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 PADI6Q6TGC4 694 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 LRRC55Q6ZSA7 311 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 BAZ2BQ9UIF8 2168 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 HNRNPDLO14979 420 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 TRIM49P0CI25 452 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 TRIM49CP0CI26 452 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 SLURP2P0DP57 97 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 LMNB1P20700 586 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 CTNNA1P35221 906 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 GLE1Q53GS7 698 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 RNF187Q5TA31 235 aaPredicted RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 NAA35Q5VZE5 725 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 KCTD16Q68DU8 428 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 UBLCP1Q8WVY7 318 aaPredicted RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 RASSF4Q9H2L5 321 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 BCL9LQ86UU0 1499 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 TARSL2A2RTX5 802 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 GABPAQ06546 454 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 EPHA7Q15375 998 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 C10orf76Q5T2E6 689 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 WDR93Q6P2C0 686 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 TRAPPC11Q7Z392 1133 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 LDHDQ86WU2 507 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 CATSPER3Q86XQ3 398 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 IFT74Q96LB3 600 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 IDI2Q9BXS1 227 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 DNAJC12Q9UKB3 198 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 RAB21Q9UL25 225 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 A0A0U1RQJ8 604 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 NMT1P30419 496 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 RTKN2Q8IZC4 609 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 SCFD1Q8WVM8 642 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 TMEM206Q9H813 350 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 A0A087X0T9 212 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 FAM228BP0C875 321 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 POLD1P28340 1107 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 GNGT1P63211 74 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 CCNI2Q6ZMN8 369 aaPredicted RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 FRMD5Q7Z6J6 570 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms