RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 VPS72Q15906 364 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
LIG4-204ENST00000611712 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 CCDC127Q96BQ5 260 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 PBKQ96KB5 322 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 STMN4Q9H169 189 aaPredicted RBP9.48□□□□□ -0.89
LIG4-204ENST00000611712 CAPN6Q9Y6Q1 641 aa9.48□□□□□ -0.89
LIG4-204ENST00000611712 FGRP09769 529 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 STAT2P52630 851 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 MYL7Q01449 175 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 BIRC3Q13489 604 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 TBC1D10BQ4KMP7 808 aaPredicted RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 KIAA0895Q8NCT3 520 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 TCHPQ9BT92 498 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 VIPAS39Q9H9C1 493 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 KIF4AO95239 1232 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 ALAS1P13196 640 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 PBX1P40424 430 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 PAPD7Q5XG87 772 aaKnown RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 HOOK3Q86VS8 718 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 SP8Q8IXZ3 490 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 ANKS4BQ8N8V4 417 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 KIFAP3Q92845 792 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 FAM20AQ96MK3 541 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 PCIF1Q9H4Z3 704 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 TDRD3Q9H7E2 651 aaKnown RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 HPCAL4Q9UM19 191 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 RGPD5Q99666 1765 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 LRRIQ3A6PVS8 624 aaPredicted RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 VGLL3A8MV65 326 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 MMP10P09238 476 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 GBP2P32456 591 aaPredicted RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 WDR93Q6P2C0 686 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 GSTA5Q7RTV2 222 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 EHD2Q9NZN4 543 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 ARHGAP20Q9P2F6 1191 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 RAB21Q9UL25 225 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
LIG4-204ENST00000611712 EXOC7Q9UPT5 735 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
LIG4-204ENST00000611712 KLRC4O43908 158 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.89
LIG4-204ENST00000611712 ACTN1P12814 892 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 PDCLQ13371 301 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 SLC18A3Q16572 532 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 FIGNQ5HY92 759 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 UHMK1Q8TAS1 419 aaKnown RBP9.46□□□□□ -0.89
LIG4-204ENST00000611712 WHAMMQ8TF30 809 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 FNBP1Q96RU3 617 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 POLLQ9UGP5 575 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 ARFGEF2Q9Y6D5 1785 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 C5P01031 1676 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 PAIP2Q9BPZ3 127 aaKnown RBP9.46□□□□□ -0.89
LIG4-204ENST00000611712 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.89
LIG4-204ENST00000611712 KCNK9Q9NPC2 374 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.89
LIG4-204ENST00000611712 RGL1Q9NZL6 768 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 ASIC3Q9UHC3 531 aa9.46□□□□□ -0.89
LIG4-204ENST00000611712 SPEF2Q9C093 1822 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 MESDQ14696 234 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 NPY5RQ15761 445 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 FAM102BQ5T8I3 360 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 DENND2CQ68D51 928 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 RIOX1Q9H6W3 641 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.9
LIG4-204ENST00000611712 TYW1Q9NV66 732 aaKnown RBP9.46□□□□□ -0.9
LIG4-204ENST00000611712 CCPG1Q9ULG6 757 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 NID2Q14112 1375 aa9.46□□□□□ -0.9
LIG4-204ENST00000611712 NR1D1P20393 614 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 PLCB3Q01970 1234 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 XKR9Q5GH70 373 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 IRF2BP1Q8IU81 584 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 SUPT20HQ8NEM7 779 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 ZNF384Q8TF68 577 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 CRAMP1Q96RY5 1269 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 NUDT12Q9BQG2 462 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 DNAJC12Q9UKB3 198 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 A0A1W2PRG0 241 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 ZBTB22O15209 634 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 HARSP12081 509 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 KLRC1P26715 233 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 LLGL1Q15334 1064 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 PTF1AQ7RTS3 328 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms